Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_G15
         (884 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0348 + 20485884-20485995,20486818-20486951,20487668-20487760     51   1e-06
01_06_1583 + 38436958-38437069,38438167-38438300,38438542-384386...    46   5e-05
04_04_1218 - 31822915-31823141,31823418-31823832,31824090-318244...    29   3.8  
07_03_0521 + 19016824-19017000,19017064-19017099,19017860-190186...    29   5.0  
05_04_0383 - 20801036-20801309,20801413-20801538,20801706-208017...    29   5.0  

>05_04_0348 + 20485884-20485995,20486818-20486951,20487668-20487760
          Length = 112

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 20/37 (54%), Positives = 25/37 (67%)
 Frame = +3

Query: 258 GGKHKVGPNLHGFFGRKTGQAAGFSYSDANKAKGITW 368
           G  HK GPNL+G FGR++G   G+SYS ANK   + W
Sbjct: 32  GAGHKQGPNLNGLFGRQSGTTPGYSYSTANKNMAVIW 68



 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 26/51 (50%), Positives = 35/51 (68%)
 Frame = +1

Query: 349 KLRALHGNDDTLFEYLENPQKYXPGNQMGVCWDSRKANERADLIAYLKSAT 501
           K  A+   ++TL++YL NP+KY PG +M V    +K  ERADLI+YLK AT
Sbjct: 62  KNMAVIWEENTLYDYLLNPKKYIPGTKM-VFPGLKKPQERADLISYLKEAT 111



 Score = 39.5 bits (88), Expect = 0.004
 Identities = 15/25 (60%), Positives = 19/25 (76%)
 Frame = +2

Query: 185 PAGNAENGKKIFVQRCAQCHTVEAG 259
           P GN + G+KIF  +CAQCHTV+ G
Sbjct: 8   PPGNPKAGEKIFKTKCAQCHTVDKG 32


>01_06_1583 +
           38436958-38437069,38438167-38438300,38438542-38438608,
           38438900-38438937,38439302-38439391
          Length = 146

 Score = 45.6 bits (103), Expect = 5e-05
 Identities = 18/34 (52%), Positives = 23/34 (67%)
 Frame = +3

Query: 267 HKVGPNLHGFFGRKTGQAAGFSYSDANKAKGITW 368
           HK GPNL+G FGR++G A GFSY   +K   + W
Sbjct: 35  HKHGPNLNGLFGRQSGTAPGFSYPSGDKIVPVIW 68



 Score = 31.9 bits (69), Expect = 0.70
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +2

Query: 185 PAGNAENGKKIFVQRCAQCHTVE 253
           P G+A  G+KIF  +CA CH V+
Sbjct: 8   PPGDAAAGEKIFRTKCAYCHAVD 30


>04_04_1218 - 31822915-31823141,31823418-31823832,31824090-31824440,
            31825391-31825549,31825965-31826093,31826257-31826460,
            31827200-31827412,31827547-31830912,31830999-31831150,
            31831912-31832407,31832646-31833456,31833537-31834728,
            31834856-31834922
          Length = 2593

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +3

Query: 180  VYLQETLKMERKFLYNDVPSATLLKLGGKHKVGPN 284
            +YLQ+ LKM R FL + V +  LL L   +K G N
Sbjct: 2487 LYLQKHLKMNRDFLPSVVAALCLLLLDRSNKQGSN 2521


>07_03_0521 +
           19016824-19017000,19017064-19017099,19017860-19018624,
           19018772-19018864,19018944-19019114,19019206-19019397,
           19019443-19019530,19019617-19019685,19019841-19020054,
           19020136-19020334,19020406-19020504,19020594-19020850,
           19020927-19021002,19021091-19021204
          Length = 849

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -2

Query: 343 ASEYENPAAWPVFRPKNPCRFGPTLCLPPSFN 248
           A+EYENP   P        +FG + C P  FN
Sbjct: 496 ATEYENPVEQPTDTRHFDHKFGASQCTPRKFN 527


>05_04_0383 -
           20801036-20801309,20801413-20801538,20801706-20801730,
           20801808-20802259,20802330-20802394,20802487-20802711,
           20804750-20804878,20805095-20805306,20806861-20806894
          Length = 513

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 274 TLCLPPSFNSVALGTSLYKNFLSIFSVSCRYTH 176
           TL +PP   SV   +S + + LS+FS  C + H
Sbjct: 168 TLLMPPPSGSVGAASSGHGSRLSLFSDDCEHRH 200


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,098,296
Number of Sequences: 37544
Number of extensions: 385461
Number of successful extensions: 795
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)