Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_G15
         (884 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74046-2|CAA98555.1|  123|Caenorhabditis elegans Hypothetical pr...    50   2e-06
AF038611-8|AAB92035.1|  111|Caenorhabditis elegans Hypothetical ...    49   5e-06
Z81051-9|CAD21703.1|  531|Caenorhabditis elegans Hypothetical pr...    31   1.4  
AL032623-13|CAA21504.1|  465|Caenorhabditis elegans Hypothetical...    29   4.4  
U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z81547-1|CAB04459.1|  354|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>Z74046-2|CAA98555.1|  123|Caenorhabditis elegans Hypothetical
           protein ZC116.2 protein.
          Length = 123

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 20/33 (60%), Positives = 24/33 (72%)
 Frame = +3

Query: 270 KVGPNLHGFFGRKTGQAAGFSYSDANKAKGITW 368
           K GP L+G  GR++GQ AGF YS ANK KG+ W
Sbjct: 42  KTGPTLNGVIGRQSGQVAGFDYSAANKNKGVVW 74



 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 20/38 (52%), Positives = 29/38 (76%)
 Frame = +1

Query: 379 TLFEYLENPQKYXPGNQMGVCWDSRKANERADLIAYLK 492
           TLF+YL +P+KY PG +M V    +KA+ERADLI +++
Sbjct: 78  TLFDYLADPKKYIPGTKM-VFAGLKKADERADLIKFIE 114



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 15/25 (60%), Positives = 18/25 (72%)
 Frame = +2

Query: 182 VPAGNAENGKKIFVQRCAQCHTVEA 256
           +P G+ E GKKIF QRC QCH V +
Sbjct: 14  IPEGDNEKGKKIFKQRCEQCHVVNS 38


>AF038611-8|AAB92035.1|  111|Caenorhabditis elegans Hypothetical
           protein E04A4.7 protein.
          Length = 111

 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 19/33 (57%), Positives = 22/33 (66%)
 Frame = +3

Query: 270 KVGPNLHGFFGRKTGQAAGFSYSDANKAKGITW 368
           K GP LHG  GR +G  +GF YS ANK KG+ W
Sbjct: 32  KTGPTLHGVIGRTSGTVSGFDYSAANKNKGVVW 64



 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 23/39 (58%), Positives = 30/39 (76%)
 Frame = +1

Query: 376 DTLFEYLENPQKYXPGNQMGVCWDSRKANERADLIAYLK 492
           +TLFEYL NP+KY PG +M V    +KA+ERADLI Y++
Sbjct: 67  ETLFEYLLNPKKYIPGTKM-VFAGLKKADERADLIKYIE 104



 Score = 40.7 bits (91), Expect = 0.001
 Identities = 14/25 (56%), Positives = 20/25 (80%)
 Frame = +2

Query: 182 VPAGNAENGKKIFVQRCAQCHTVEA 256
           +PAG+ E GKK++ QRC QCH V++
Sbjct: 4   IPAGDYEKGKKVYKQRCLQCHVVDS 28


>Z81051-9|CAD21703.1|  531|Caenorhabditis elegans Hypothetical
           protein C55A6.10 protein.
          Length = 531

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 239 CHTVEAGWQTQSRTESTWILWPKNWPGCRILILR 340
           C T+E  W T SR E    L+ +N  G  +L+ R
Sbjct: 294 CQTLEGDWTTSSRLEMATKLYSRNLSGTTLLVPR 327


>AL032623-13|CAA21504.1|  465|Caenorhabditis elegans Hypothetical
           protein Y43F8B.13 protein.
          Length = 465

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -3

Query: 267 VCHPASTVWHWAHRCTKIFFPFSAFP 190
           VC   ST W +A RC K FF     P
Sbjct: 375 VCEKLSTAWDFAERCHKNFFNIVFLP 400


>U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical
           protein F41C3.6 protein.
          Length = 250

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 498 YQVILKVIXNSIRSIFHNISXNYFL 572
           Y V L+ + N ++SI HNI  +YFL
Sbjct: 20  YFVELRSLKNLLKSILHNIENDYFL 44


>Z81547-1|CAB04459.1|  354|Caenorhabditis elegans Hypothetical
           protein F53F8.1 protein.
          Length = 354

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 16/55 (29%), Positives = 20/55 (36%)
 Frame = +2

Query: 212 KIFVQRCAQCHTVEAGWQTQSRTESTWILWPKNWPGCRILILRCQ*S*GHYMXMT 376
           K F Q C + +T  +      R  S    +P  WPGC     R      HY   T
Sbjct: 254 KCFYQGCGKVYTKSSHLTAHERVHSGEKPYPCEWPGCSWRFARSDELTRHYRKHT 308


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,198,821
Number of Sequences: 27780
Number of extensions: 359374
Number of successful extensions: 867
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)