Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_G14
(1058 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.002
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.12
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.21
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.27
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 0.69
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.83
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 28 1.9
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 3.4
SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr... 26 7.8
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 26 7.8
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 38.3 bits (85), Expect = 0.002
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -3
Query: 624 PPPPXXXGGPPPPXPKXKXKXXGXXXXPPPP 532
PPP GGPPPP P G PPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 34.7 bits (76), Expect = 0.022
Identities = 19/47 (40%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = +2
Query: 365 PKKXPPPPXXXKXPPXPPPXKG--GSXPPXGGXXXKPPPPXKXKXGG 499
P PPP PP PPP G G+ PP PPPP GG
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPP-----PPPPPPPAVSAGG 789
Score = 32.7 bits (71), Expect = 0.090
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +2
Query: 377 PPPPXXXKXPPXPPPXKGGSXPPXGGXXXKPPPPXKXKXGGGXXKKXXXPPXGGGG 544
PPPP P P P P G PPPP G P GG
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 32.3 bits (70), Expect = 0.12
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +2
Query: 371 KXPPPPXXXKXPPXPPPXKGGSXPPXGGXXXKPPPPXKXKXGGGXXKKXXXPP 529
K PPPP P P P PP PPPP G PP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.5 bits (63), Expect = 0.83
Identities = 21/71 (29%), Positives = 22/71 (30%), Gaps = 6/71 (8%)
Frame = -3
Query: 624 PPPPXXXGGPPP-----PXPKXKXKXXGXXXXPPPPXGGXXXFXKXPPPXXFFXGGGGXX 460
PPPP P P P P G PPPP PPP GG
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRY 792
Query: 459 XXP-PXGGXDP 430
P P +P
Sbjct: 793 YAPAPQAEPEP 803
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = -3
Query: 597 PPPPXPKXKXKXXGXXXXPPPPXGGXXXFXKXPPPXXFFXGGGGXXXXPP 448
PPPP P P PP PPP G G PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.9 bits (59), Expect = 2.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 681 PPPPPXXXPPPPPPXGG 731
PP P PPPPPP G
Sbjct: 753 PPAPIMGGPPPPPPPPG 769
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/18 (61%), Positives = 11/18 (61%), Gaps = 2/18 (11%)
Frame = +3
Query: 681 PPPPPX--XXPPPPPPXG 728
PPP P PPPPPP G
Sbjct: 752 PPPAPIMGGPPPPPPPPG 769
Score = 27.5 bits (58), Expect = 3.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 682 PPPPPXXXXPPPPP 723
PPP P PPPPP
Sbjct: 752 PPPAPIMGGPPPPP 765
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +2
Query: 365 PKKXPPPPXXXKXPPXPPPXKGGSXPPXGGXXXKPPP 475
P PPPP P PPP + G P P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 910 PPPXPXXPXXXXXXXXPPPXPXP 978
PPP P P PPP P P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 913 PPXPXXPXXXXXXXXPPPXPXPP 981
PP P P PPP P PP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/18 (61%), Positives = 11/18 (61%), Gaps = 4/18 (22%)
Frame = +2
Query: 680 PPPPPP----XXPXPPPP 721
PPPPPP P PPPP
Sbjct: 763 PPPPPPGVAGAGPPPPPP 780
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/34 (38%), Positives = 13/34 (38%), Gaps = 6/34 (17%)
Frame = +1
Query: 910 PPPXPXXPXXXXXXXXPPPXPXP------PXPPP 993
P P P P PPP P P P PPP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.3 bits (70), Expect = 0.12
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +2
Query: 356 PLXPKKXPPPPXXXKXPPXPP---PXKGGSXPPXGGXXXKPPPP 478
P+ P+ PP PP PP P + P G PPPP
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 28.7 bits (61), Expect = 1.5
Identities = 11/16 (68%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
Frame = +3
Query: 681 PPPPPXXXPPPP--PP 722
PPPPP PPPP PP
Sbjct: 1707 PPPPPMSVPPPPSAPP 1722
Score = 27.5 bits (58), Expect = 3.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 680 PPPPPPXXPXPPPP 721
P PPPP PPPP
Sbjct: 1705 PTPPPPPMSVPPPP 1718
Score = 27.1 bits (57), Expect = 4.5
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 624 PPPPXXXGGPPPPXPKXKXKXXGXXXXPPPP 532
PPPP PPP P G PPPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPA---GPPSAPPPP 1734
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.5 bits (68), Expect = 0.21
Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Frame = +2
Query: 680 PPPP---PPXXPXPPPPXGGXXKXK 745
PPPP PP P PPPP G K K
Sbjct: 13 PPPPGFEPPSQPPPPPPPGYVKKRK 37
Score = 30.3 bits (65), Expect = 0.48
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 3/23 (13%)
Frame = +3
Query: 681 PPPPPXXXP---PPPPPXGGXXK 740
PPPPP P PPPPP G K
Sbjct: 12 PPPPPGFEPPSQPPPPPPPGYVK 34
Score = 28.3 bits (60), Expect = 1.9
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 901 PXXPPPXPXXPXXXXXXXXPPPXPXPPXPP 990
P PPP P P PP P PP PP
Sbjct: 6 PGNPPPPPPPP-----GFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 3.4
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 690 PPXXXPPPPPPXG 728
PP PPPPPP G
Sbjct: 5 PPGNPPPPPPPPG 17
Score = 27.5 bits (58), Expect = 3.4
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -3
Query: 603 GGPPPPXPKXKXKXXGXXXXPPPP 532
G PPPP P + PPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.27
Identities = 18/70 (25%), Positives = 22/70 (31%)
Frame = +2
Query: 332 APKKRGXXPLXPKKXPPPPXXXKXPPXPPPXKGGSXPPXGGXXXKPPPPXKXKXGGGXXK 511
+P P+ P P PP PPP S +PPPP +
Sbjct: 266 SPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPS-----RR 320
Query: 512 KXXXPPXGGG 541
PP G G
Sbjct: 321 NRGKPPIGNG 330
Score = 28.7 bits (61), Expect = 1.5
Identities = 17/57 (29%), Positives = 19/57 (33%)
Frame = -3
Query: 597 PPPPXPKXKXKXXGXXXXPPPPXGGXXXFXKXPPPXXFFXGGGGXXXXPPXGGXDPP 427
PPPP P + + PP G PPP G PP G PP
Sbjct: 312 PPPPPPSRRNRGK------PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPP 362
Score = 28.7 bits (61), Expect = 1.5
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Frame = +2
Query: 404 PPXPPPXKG--GSXP-PXGGXXXKPPPPXKXKXGGG 502
PP PPP GS P P G PPPP + G
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTG 373
Score = 28.3 bits (60), Expect = 1.9
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = +2
Query: 368 KKXPPPPXXXKXPPXPPPXKGGSXPPXGGXXXKPPPPXKXKXGG 499
K+ PPPP + PP GS PPPP + G
Sbjct: 309 KRPPPPPPPSRRNRGKPPIGNGS---SNSSLPPPPPPPRSNAAG 349
Score = 27.5 bits (58), Expect = 3.4
Identities = 17/61 (27%), Positives = 18/61 (29%)
Frame = -3
Query: 624 PPPPXXXGGPPPPXPKXKXKXXGXXXXPPPPXGGXXXFXKXPPPXXFFXGGGGXXXXPPX 445
P PP PPPP P+ PPP P P G PP
Sbjct: 352 PLPPQGRSAPPPPPPRSAPS----TGRQPPPLSSSRAVSNPPAPPPAIPGRSA-PALPPL 406
Query: 444 G 442
G
Sbjct: 407 G 407
Score = 26.6 bits (56), Expect = 5.9
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 377 PPPPXXXKXPPXPPPXKGGSXPPXGGXXXKPPPP 478
PPPP P P +G S PP PPPP
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPP-------PPPP 366
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/42 (28%), Positives = 12/42 (28%)
Frame = -2
Query: 622 PPPPXXGGXPPPPXXKXXKXXXXXGXPPPPXXGXXXFFXTPP 497
PPPP PP PPPP PP
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPP 355
Score = 26.2 bits (55), Expect = 7.8
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 3/37 (8%)
Frame = +2
Query: 377 PPPPXXXKXPPXPPPXKGGSXP---PXGGXXXKPPPP 478
PP P PP PP S P P G P PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.4 bits (53), Expect(2) = 0.69
Identities = 11/37 (29%), Positives = 12/37 (32%)
Frame = +1
Query: 877 PHKXXXXXPXXPPPXPXXPXXXXXXXXPPPXPXPPXP 987
P+ P PP P PP P PP P
Sbjct: 161 PNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 22.6 bits (46), Expect(2) = 0.69
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 964 PXPXPPXPPP 993
P P PP PPP
Sbjct: 234 PLPAPPPPPP 243
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 29.5 bits (63), Expect = 0.83
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = +2
Query: 428 GGSXPPXGGXXXKPPPPXKXKXGGGXXKKXXXPPXGGGGXXXXPXXFXXFXGXGGGGP 601
GG GG PPP G G G GG P F G GGGP
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGP 244
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 356 PLXPKKXPPPPXXXKXPPXPPPXKGGSXPPXG 451
P P + PPPP P P S PP G
Sbjct: 412 PARPTESPPPPPISSSSTTPRPDDKPSLPPRG 443
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +2
Query: 356 PLXPKKXPPPPXXXKXPPXPPPXKGGSXPPXGGXXXKPPPP 478
PL PP P PP P P P PPP
Sbjct: 1025 PLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPP 1065
Score = 26.6 bits (56), Expect = 5.9
Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Frame = +2
Query: 377 PPPPXXXKXPPXPPPXKGGSXP-PXGGXXXKPPP 475
P P PP PPP + P P G PPP
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 26.6 bits (56), Expect = 5.9
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Frame = +2
Query: 365 PKKXPP-PPXXXKXPPXPPPXKGGSXP-PXGGXXXKPPPPXK 484
P + PP P PP PPP P P G P P K
Sbjct: 1194 PSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAK 1235
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 377 PPPPXXXKXPPXPPPXKGGSXPPXGGXXXKPPPP 478
PP P + PP P P G PP PP P
Sbjct: 1189 PPVPPPSEAPPVPKPSVG--VPPVPPPSTAPPVP 1220
>SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 172
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = +2
Query: 359 LXPKKXPPPPXXXKXPPXPPP--XKGGSXP 442
L P+ PPP + PPP +GGS P
Sbjct: 26 LPPRTMAPPPAPSRVQQAPPPTAVQGGSSP 55
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +2
Query: 356 PLXPKKXPPPPXXXKXPPXPPPXKGGSXPPXGGXXXKPP 472
P K P PP + P P P + S P PP
Sbjct: 42 PAPVSKKPLPPPTRRLPRKPLPFRSTSLQPPSSQPPAPP 80
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.153 0.529
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,653,151
Number of Sequences: 5004
Number of extensions: 51917
Number of successful extensions: 558
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 332
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 557214894
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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