Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_G11
         (902 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47808-5|CAA87773.1|  294|Caenorhabditis elegans Hypothetical pr...    89   5e-18
Z68760-4|CAE17822.1|  160|Caenorhabditis elegans Hypothetical pr...    30   2.6  

>Z47808-5|CAA87773.1|  294|Caenorhabditis elegans Hypothetical
           protein D2013.7 protein.
          Length = 294

 Score = 88.6 bits (210), Expect = 5e-18
 Identities = 49/160 (30%), Positives = 85/160 (53%), Gaps = 14/160 (8%)
 Frame = +3

Query: 162 RNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNYAMDVYELNRRVNSSES 341
           +N    + +GTL+G  +KG ++VTNCF +P  E  D +E +  +   +    ++ + +E 
Sbjct: 30  KNTGQEKCMGTLMGYYEKGSIQVTNCFAIPFNESNDDLEIDDQFNQQMISALKKTSPNEQ 89

Query: 342 IVGWWATGNEVTNHSSVIHEYYSRECRE--------PVHV-TLDTSLAGG---RMGLRAY 485
            VGW+ T +++T+   + H+YY R   E        P+ V T+DT+ +G    RM +RAY
Sbjct: 90  PVGWFLTTSDITSSCLIYHDYYVRVITEASARRESPPIVVLTIDTTFSGDMSKRMPVRAY 149

Query: 486 VCVPLGVPN--GKQGCMFTPVDVTLTCYEPEIVXLQVCXK 599
           +    G+P   G    +F P+ V L  +  E+V +Q+  K
Sbjct: 150 LRSKAGIPGAAGPHCAIFNPLRVELAAFPGELVAMQLIEK 189


>Z68760-4|CAE17822.1|  160|Caenorhabditis elegans Hypothetical
           protein F36H1.9 protein.
          Length = 160

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 235 TASACHTKNMPIKSKRNLITRWMFTS 312
           T  ACHT  M +  K+N IT W +++
Sbjct: 55  TLVACHTLQMFLAEKKNTITHWKYST 80


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,498,609
Number of Sequences: 27780
Number of extensions: 370193
Number of successful extensions: 863
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)