Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_G07
         (849 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    35   0.071
01_03_0005 + 11568545-11569119,11569179-11569191                       30   2.0  
11_06_0557 - 24955837-24956214,24957225-24957395,24957576-249576...    29   6.2  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   6.2  

>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 35.1 bits (77), Expect = 0.071
 Identities = 17/46 (36%), Positives = 17/46 (36%)
 Frame = -3

Query: 703  PPPPPXXGXXXXXXXXGPXVXGGGXPPPXFXXXEKXKKPPXXGGGG 566
            PPPPP  G         P    GG PPP          PP  G GG
Sbjct: 1149 PPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGG 1194



 Score = 30.3 bits (65), Expect = 2.0
 Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 4/70 (5%)
 Frame = +3

Query: 567  PPPPXXGGFFXFSXXXXXGGGXPPPXTXGPXXXXXXXXPXXGGGGGRXXXKXPP----XX 734
            P PP  G +         G G PPP             P  GG GG      PP      
Sbjct: 1087 PLPPTLGDYGVAPPPPSIGAGAPPPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIG 1146

Query: 735  XXPXPXPXXG 764
              P P P  G
Sbjct: 1147 GVPPPPPVGG 1156


>01_03_0005 + 11568545-11569119,11569179-11569191
          Length = 195

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 20/59 (33%), Positives = 20/59 (33%)
 Frame = +3

Query: 567 PPPPXXGGFFXFSXXXXXGGGXPPPXTXGPXXXXXXXXPXXGGGGGRXXXKXPPXXXXP 743
           PPPP  GG    S     GGG   P   G            GGGGG      PP    P
Sbjct: 93  PPPPYSGGGGGSSTG---GGGIYYPPPTGGGGGGGGGWQQGGGGGGAYPTPPPPNPFLP 148


>11_06_0557 -
           24955837-24956214,24957225-24957395,24957576-24957635,
           24958419-24958623,24958710-24958953,24959103-24959394,
           24959734-24960828,24960915-24961409,24961665-24961823,
           24961893-24962387
          Length = 1197

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 15/55 (27%), Positives = 17/55 (30%)
 Frame = -3

Query: 748 GXGXXXXGGXXXLXRPPPPPXXGXXXXXXXXGPXVXGGGXPPPXFXXXEKXKKPP 584
           G G    G        PPPP           GP   GGG  P      ++   PP
Sbjct: 46  GGGGADGGSPASRAASPPPPTAAGGQGGVGGGPVSGGGGSAPGGAATAQREGAPP 100


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 4/50 (8%)
 Frame = -3

Query: 703 PPPPPXXGXXXXXXXXGPXVX----GGGXPPPXFXXXEKXKKPPXXGGGG 566
           PPPPP  G        GP       G   PPP     +K   PP    GG
Sbjct: 336 PPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGG 385


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,652,300
Number of Sequences: 37544
Number of extensions: 434215
Number of successful extensions: 983
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)