Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_G07
         (849 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF038615-6|AAB94146.1|  157|Caenorhabditis elegans Ground-like (...    34   0.11 
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    31   1.4  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    31   1.4  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    31   1.4  
AF068713-14|AAK73895.1|  172|Caenorhabditis elegans Ground-like ...    28   7.3  

>AF038615-6|AAB94146.1|  157|Caenorhabditis elegans Ground-like (grd
           related) protein19 protein.
          Length = 157

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 15/34 (44%), Positives = 15/34 (44%)
 Frame = -3

Query: 790 FFFFFXXKXPXXGXGXGXXXXGGXXXLXRPPPPP 689
           F FFF    P  G G G    GG      PPPPP
Sbjct: 16  FAFFFPRVTPNDGCGCGCGGGGGGGGCCAPPPPP 49


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 24/83 (28%), Positives = 24/83 (28%)
 Frame = +3

Query: 567 PPPPXXGGFFXFSXXXXXGGGXPPPXTXGPXXXXXXXXPXXGGGGGRXXXKXPPXXXXPX 746
           PPPP  GG    S      GG PPP             P  GG  G      PP    P 
Sbjct: 743 PPPPPPGGLPPIS------GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPM 796

Query: 747 PXPXXGXXXXKKKKKKXPPXXXF 815
                     KK  K   P   F
Sbjct: 797 APVIPDYLPPKKVPKVDGPMRKF 819



 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -3

Query: 703 PPPPPXXGXXXXXXXXGPXVXGGGXPPP 620
           PPPPP  G         P    GG PPP
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPP 787


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 24/83 (28%), Positives = 24/83 (28%)
 Frame = +3

Query: 567 PPPPXXGGFFXFSXXXXXGGGXPPPXTXGPXXXXXXXXPXXGGGGGRXXXKXPPXXXXPX 746
           PPPP  GG    S      GG PPP             P  GG  G      PP    P 
Sbjct: 743 PPPPPPGGLPPIS------GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPM 796

Query: 747 PXPXXGXXXXKKKKKKXPPXXXF 815
                     KK  K   P   F
Sbjct: 797 APVIPDYLPPKKVPKVDGPMRKF 819



 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -3

Query: 703 PPPPPXXGXXXXXXXXGPXVXGGGXPPP 620
           PPPPP  G         P    GG PPP
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPP 787


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 24/83 (28%), Positives = 24/83 (28%)
 Frame = +3

Query: 567 PPPPXXGGFFXFSXXXXXGGGXPPPXTXGPXXXXXXXXPXXGGGGGRXXXKXPPXXXXPX 746
           PPPP  GG    S      GG PPP             P  GG  G      PP    P 
Sbjct: 326 PPPPPPGGLPPIS------GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPM 379

Query: 747 PXPXXGXXXXKKKKKKXPPXXXF 815
                     KK  K   P   F
Sbjct: 380 APVIPDYLPPKKVPKVDGPMRKF 402



 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -3

Query: 703 PPPPPXXGXXXXXXXXGPXVXGGGXPPP 620
           PPPPP  G         P    GG PPP
Sbjct: 343 PPPPPPGGCPPPPPPPPPGGFKGGPPPP 370


>AF068713-14|AAK73895.1|  172|Caenorhabditis elegans Ground-like
           (grd related) protein29 protein.
          Length = 172

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 746 GGXXXXGGXFXXGXPPPPP 690
           GG    GG +  G PPPPP
Sbjct: 52  GGGCGYGGGYGCGIPPPPP 70


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,853,745
Number of Sequences: 27780
Number of extensions: 269727
Number of successful extensions: 762
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)