Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_G06
(930 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 37 0.004
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.008
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.10
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.18
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.93
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 29 0.93
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 28 1.6
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 28 2.2
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 2.2
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 2.2
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 3.8
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 6.6
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 8.7
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 8.7
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 37.1 bits (82), Expect = 0.004
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = +3
Query: 852 PGXPPPXAPXPPXXXPPPXXRPPPPP 929
PG PPP P PP PP PPPPP
Sbjct: 6 PGNPPPPPP-PPGFEPPSQPPPPPPP 30
Score = 33.9 bits (74), Expect = 0.033
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 520 PPXXXPPGXPXXGXXPPPXXPPXPXPG 600
PP PP P G PP PP P PG
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 518 PPPXPXXPXXPXXGXXPPPPXPPPP 592
PP P P P P P PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.9 bits (59), Expect = 2.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 518 PPPXPXXPXXPXXGXXPPPPXP 583
PPP P P PPPP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 535 PPGXPXXGXXPPPXXPPXPXPGXXPP 612
PPG P PP PP P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 2/25 (8%)
Frame = +3
Query: 861 PPPXAP--XPPXXXPPPXXRPPPPP 929
PP P PP PP PPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.9 bits (79), Expect = 0.008
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +2
Query: 518 PPPXPXXPXXPXXGXXPPPPXPPPPXXGG 604
PPP P P G PPPP PP GG
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 35.5 bits (78), Expect = 0.011
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +2
Query: 518 PPPXPXXPXXPXXGXXPPPPXPPPPXXGGXP 610
P P P P P G PPPP PP G P
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPP 776
Score = 33.1 bits (72), Expect = 0.057
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 512 KXPPPXPXXPXXPXXGXXPPPPXPPPPXXGGXP 610
K PPP P P P P PP P GG P
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPP 762
Score = 31.1 bits (67), Expect = 0.23
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 855 GXPPPXAPXPPXXXPPPXXRPPPPP 929
G PPP P P P PPPPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.71
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 523 PXXXPPGXPXXGXXPPPXXPPXPXPGXXPP 612
P PP P G PPP PP PP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 843 PXHPGXPPPXAPXPPXXXPPPXXRPPPP 926
P G PPP P PP PPPP
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 861 PPPXAPXPPXXXPPPXXRPPPPP 929
PPP A P P P PPP P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAP 756
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 852 PGXPPPXAPXPPXXXPPPXXRPPPPP 929
P P P P PPP PPPPP
Sbjct: 746 PAPIPVPPPAPIMGGPPP---PPPPP 768
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.3 bits (70), Expect = 0.10
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -3
Query: 928 GGGGGRXXGG-GXXXGGXGAXGGGXPGWXGXWW 833
GGG G GG G GG G GGG G G W
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPGW 273
Score = 29.1 bits (62), Expect = 0.93
Identities = 18/35 (51%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Frame = -1
Query: 609 GXPPXXGG-GGXGG-GGXXPXXGXXGXXGXG-GGF 514
G PP GG GG GG GG G G G G GGF
Sbjct: 199 GPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGF 233
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = -2
Query: 611 GGXXPGXGXG-GXXGGGXXPXXGXPGGXXXGG 519
GG G G G G GGG G PGG G
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.5 bits (68), Expect = 0.18
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 843 PXHPGXPPPXAPXPPXXXPPPXXRPPPPP 929
P P PP AP P PP + PPPP
Sbjct: 177 PAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +3
Query: 843 PXHPGXPPPXAPXPPXXXPPPXXRPP 920
P P P P PP PPP + P
Sbjct: 185 PSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
Frame = +3
Query: 843 PXHPGXPPPX---APXPPXXXPPPXXRPPPP 926
P P PPP AP P PP PPP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 0.93
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Frame = +3
Query: 852 PGXPPPXAPXPPXXXPPPXXRP--PPPP 929
P PP P PP P P P PPPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 852 PGXPPPXAPXPPXXXPPPXXRPPPP 926
P P P PP PPP PP P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMP 1724
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 843 PXHPGXPPPXAPXPPXXXPPPXXRPPPP 926
P P AP PP PPP PPPP
Sbjct: 1694 PQSAAPPQMSAPTPP---PPPMSVPPPP 1718
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 843 PXHPGXPPPXAPXPPXXXPPPXXRPPPPP 929
P P PP PP PP PPP P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +3
Query: 843 PXHPGXPPPXAPXPPXXXPPPXXRPPPPP 929
P HP PP P PPPPP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPP 1711
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Frame = +2
Query: 518 PPPXPXXPXXPXXGXXP--PPPXPPPP 592
PPP P P P PP PPPP
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +2
Query: 521 PPXPXXPXXPXXGXXPPPPXPPPPXXGGXP 610
PP P P PPP PP G P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 29.1 bits (62), Expect = 0.93
Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Frame = +3
Query: 852 PGXPPPXAPXPPXXXPPPXXR--PPPPP 929
P P P PP P P + PPPPP
Sbjct: 721 PAIKPQVTPAPPTPAPTPAVKHHPPPPP 748
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = -1
Query: 600 PXXGGGGXGG-GGXXPXXGXXGXXGXGGG 517
P GGG GG GG G G G GGG
Sbjct: 443 PRTGGGSRGGRGGFGGRGGFGGRGGFGGG 471
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 27.9 bits (59), Expect = 2.2
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 557 GXXPPPPXPPPP 592
G PPPP PPPP
Sbjct: 303 GGLPPPPPPPPP 314
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 852 PGXPPPXAPXPPXXXPPPXXRPPPPP 929
P PP A P P PPPPP
Sbjct: 169 PSFQPPSAAAPATSLPSDYNPPPPPP 194
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 521 PPXPXXPXXPXXGXXPPPPXPPPP 592
PP P PPP PPPP
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPP 196
Score = 26.2 bits (55), Expect = 6.6
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 566 PPPPXPPPP 592
PPPP PPPP
Sbjct: 189 PPPPPPPPP 197
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 928 GGGGGRXXGGGXXXGGXGAXGGGXPGWXG 842
G GG R G G GG G GG G G
Sbjct: 31 GRGGARGGGRGGARGGRGGRGGARGGRGG 59
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Frame = +3
Query: 519 PPPXPPXRXXPXXGXP-PP--XXPPXPXXXXXXPXXGGKPP 632
PPP PP R P PP P P P G +PP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPP 377
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +2
Query: 521 PPXPXXPXXPXXGXXPPPPXPPPPXXGGXP 610
PP P P P PP PP G P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAP 444
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.2 bits (55), Expect = 6.6
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 566 PPPPXPPPP 592
PPPP PPPP
Sbjct: 945 PPPPPPPPP 953
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +3
Query: 522 PPXPPXRXXPXXGXPPPXXPPXPXXXXXXPXXGGKPP 632
P PP P P P PP P G+PP
Sbjct: 104 PREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPP 140
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +1
Query: 499 AAXXKKXPPXXXPPGXPXXGXXPPPXXPPXPXPGXXPPXRG 621
AA PP P P PP PP P P G
Sbjct: 1185 AAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG 1225
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.150 0.541
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,571,174
Number of Sequences: 5004
Number of extensions: 19580
Number of successful extensions: 376
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 250
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 471335896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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