Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_G04
(895 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 40 6e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.006
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.024
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 3.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 5.6
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 6.3
SPAC26A3.08 |smb1|smb|Sm snRNP core protein Smb1|Schizosaccharom... 26 6.3
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 6.3
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 8.3
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 8.3
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 26 8.3
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 23 8.5
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 39.5 bits (88), Expect = 6e-04
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = +1
Query: 586 PPXXPPPPPXXXGGGXPPPXKKKXXXXXXPPPPPP 690
P P PPP GG PPP PPPPPP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 36.7 bits (81), Expect = 0.004
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 589 PXXPPPPPXXXGGGXPPPXKKKXXXXXXPPPPPP 690
P PPP GG PPP PPPPPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 35.5 bits (78), Expect = 0.010
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +1
Query: 586 PPXXPPPPPXXXGGGXPPPXKKKXXXXXXPPPPPP 690
P PPP P G PPP PPPPPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 34.3 bits (75), Expect = 0.024
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = +1
Query: 589 PXXPPPPPXXXGGGXPPPXKKKXXXXXXPPPPP 687
P PPPPP G G PPP PPPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPP----------PPPPP 783
Score = 26.6 bits (56), Expect = 4.8
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 586 PPXXPPPPPXXXGGG 630
PP PPPPP GG
Sbjct: 775 PPPPPPPPPAVSAGG 789
Score = 26.2 bits (55), Expect = 6.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 4/39 (10%)
Frame = +1
Query: 586 PPXXPPPP----PXXXGGGXPPPXKKKXXXXXXPPPPPP 690
PP PPPP P P P PPPPPP
Sbjct: 732 PP--PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 26.2 bits (55), Expect = 6.3
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3
Query: 869 PXPPPPPPP 843
P PPPPPPP
Sbjct: 775 PPPPPPPPP 783
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.3 bits (80), Expect = 0.006
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = +1
Query: 586 PPXXPPPPPXXXGGGXPPPXKKKXXXXXXPPPPPP 690
PP PPPPP G PP PPPPPP
Sbjct: 311 PP--PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 31.1 bits (67), Expect = 0.22
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +1
Query: 589 PXXPPPPPXXXGGGXPPPXKKKXXXXXXPPPPPP 690
P PPPP G P P + + PPPPPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGR----SAPPPPPP 366
Score = 30.3 bits (65), Expect = 0.39
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 586 PPXXPPPPPXXXGGGXPPPXKKKXXXXXXPPPPPP 690
PP PPPP G PP PP PPP
Sbjct: 361 PP--PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.1 bits (67), Expect = 0.22
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +1
Query: 586 PPXXPPPPPXXXGGGXPPPXKKKXXXXXXPPPPPP 690
PP PPPPP G PP + PPPPPP
Sbjct: 5 PPGNPPPPPPPPG--FEPPSQP-------PPPPPP 30
Score = 29.5 bits (63), Expect(2) = 0.024
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3
Query: 863 PPPPPPPXXXKKKK 822
PPPPPPP KK+K
Sbjct: 24 PPPPPPPGYVKKRK 37
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 869 PXPPPPPPPXXXKKKKK 819
P PPPPPP KK+K
Sbjct: 21 PSQPPPPPPPGYVKKRK 37
Score = 25.8 bits (54), Expect(2) = 0.42
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3
Query: 863 PPPPPPPXXXKKKKK 819
PPPPPP K+K K
Sbjct: 25 PPPPPPGYVKKRKNK 39
Score = 23.4 bits (48), Expect(2) = 0.024
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 869 PXPPPPPP 846
P PPPPPP
Sbjct: 9 PPPPPPPP 16
Score = 22.6 bits (46), Expect(2) = 0.42
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3
Query: 869 PXPPPPPPP 843
P PPPPPP
Sbjct: 6 PGNPPPPPP 14
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 27.1 bits (57), Expect = 3.6
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 863 PPPPPPPXXXKKK 825
PPPPPPP +KK
Sbjct: 1096 PPPPPPPAEVEKK 1108
Score = 26.6 bits (56), Expect = 4.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 878 KXXPXPPPPPPPXXXKKKK 822
K PPPPPPP +KK
Sbjct: 1090 KPSAVPPPPPPPPAEVEKK 1108
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 6.3
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3
Query: 869 PXPPPPPPP 843
P PPPPPPP
Sbjct: 189 PPPPPPPPP 197
Score = 26.2 bits (55), Expect = 6.3
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3
Query: 869 PXPPPPPPP 843
P PPPPPPP
Sbjct: 236 PAPPPPPPP 244
Score = 23.0 bits (47), Expect(2) = 5.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 586 PPXXPPPPP 612
PP PPPPP
Sbjct: 189 PPPPPPPPP 197
Score = 21.4 bits (43), Expect(2) = 5.6
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 634 PPPXKKKXXXXXXPPPPPP 690
P K+ PPPPPP
Sbjct: 225 PTYTPKQADPLPAPPPPPP 243
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 6.3
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3
Query: 869 PXPPPPPPP 843
P PPPPPPP
Sbjct: 306 PPPPPPPPP 314
>SPAC26A3.08 |smb1|smb|Sm snRNP core protein
Smb1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 147
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 601 PPPPXXXGGGXPPP 642
PPPP G G PPP
Sbjct: 129 PPPPAGFGRGAPPP 142
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.2 bits (55), Expect = 6.3
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3
Query: 869 PXPPPPPPP 843
P PPPPPPP
Sbjct: 945 PPPPPPPPP 953
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 598 PPPPPXXXGGGXPPPXKKKXXXXXXPPPPPP 690
PPPPP PPP P PPP
Sbjct: 1707 PPPPPM----SVPPPPSAPPMPAGPPSAPPP 1733
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 598 PPPPPXXXGGGXPPPXKKKXXXXXXPPPP 684
PPP G PPP PPPP
Sbjct: 209 PPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 598 PPPPPXXXGGGXPPPXKKKXXXXXXPPPP 684
PPP G PPP PPPP
Sbjct: 222 PPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 598 PPPPPXXXGGGXPPPXKKKXXXXXXPPPP 684
PPP G PPP PPPP
Sbjct: 235 PPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 598 PPPPPXXXGGGXPPPXKKKXXXXXXPPPP 684
PPP G PPP PPPP
Sbjct: 248 PPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 598 PPPPPXXXGGGXPPPXKKKXXXXXXPPPP 684
PPP G PPP PPPP
Sbjct: 261 PPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 598 PPPPPXXXGGGXPPPXKKKXXXXXXPPPP 684
PPP G PPP PPPP
Sbjct: 274 PPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 598 PPPPPXXXGGGXPPPXKKKXXXXXXPPPP 684
PPP G PPP PPPP
Sbjct: 287 PPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 598 PPPPPXXXGGGXPPPXKKKXXXXXXPPPP 684
PPP G PPP PPPP
Sbjct: 300 PPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 598 PPPPPXXXGGGXPPPXKKKXXXXXXPPPP 684
PPP G PPP PPPP
Sbjct: 313 PPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 25.8 bits (54), Expect = 8.3
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = -3
Query: 689 GGGGGGXXXXXXFFFXGGGXPPPXXXGGGGGXXGGF 582
GGG GG F GG PP GG GG GGF
Sbjct: 187 GGGFGG--------FGGGSGGPPPGPGGFGG-FGGF 213
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 23.4 bits (48), Expect(2) = 8.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 869 PXPPPPPP 846
P PPPPPP
Sbjct: 3 PAPPPPPP 10
Score = 20.6 bits (41), Expect(2) = 8.5
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -3
Query: 863 PPPPPPP 843
PPPPP P
Sbjct: 6 PPPPPAP 12
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,659,276
Number of Sequences: 5004
Number of extensions: 23423
Number of successful extensions: 274
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 450492750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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