Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_F22
(891 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC073131-1|AAH73131.1| 213|Homo sapiens zinc finger, AN1-type d... 56 2e-07
BC027707-1|AAH27707.1| 213|Homo sapiens ZFAND5 protein protein. 56 2e-07
BC011018-1|AAH11018.1| 213|Homo sapiens zinc finger, AN1-type d... 56 2e-07
AL135924-4|CAD13440.1| 213|Homo sapiens zinc finger, AN1-type d... 56 2e-07
AL135924-3|CAI16263.1| 211|Homo sapiens zinc finger, AN1-type d... 56 2e-07
AF062347-1|AAC42602.1| 213|Homo sapiens zinc finger protein 216... 56 2e-07
AF062346-1|AAC42601.1| 213|Homo sapiens zinc finger protein 216... 56 2e-07
AF062072-1|AAC61801.1| 213|Homo sapiens zinc finger protein 216... 56 2e-07
CR533476-1|CAG38507.1| 208|Homo sapiens AWP1 protein. 52 2e-06
BC005283-1|AAH05283.1| 208|Homo sapiens zinc finger, AN1-type d... 52 2e-06
AJ251095-1|CAC14876.1| 208|Homo sapiens PRK1-associated protein... 52 2e-06
AF261138-1|AAG44674.1| 208|Homo sapiens HT032 protein. 52 2e-06
AF061739-1|AAD17528.1| 186|Homo sapiens unknown protein. 52 2e-06
DQ230535-1|ABA64475.1| 407|Homo sapiens RAP1 short isoform prot... 44 7e-04
DQ230534-1|ABA64474.1| 531|Homo sapiens RAP1 long isoform protein. 44 7e-04
DQ230533-1|ABA64473.1| 491|Homo sapiens RAP1 protein. 44 7e-04
BT007107-1|AAP35771.1| 491|Homo sapiens putative Rab5 GDP/GTP e... 44 7e-04
BC015330-1|AAH15330.1| 491|Homo sapiens RAB guanine nucleotide ... 44 7e-04
AK223329-1|BAD97049.1| 491|Homo sapiens RAB guanine nucleotide ... 44 7e-04
AK127790-1|BAC87138.1| 708|Homo sapiens protein ( Homo sapiens ... 44 7e-04
AJ250042-1|CAB57359.1| 491|Homo sapiens Rab5 GDP/GTP exchange f... 44 7e-04
AC027644-1|AAQ93362.1| 491|Homo sapiens unknown protein. 44 7e-04
BC072681-1|AAH72681.1| 843|Homo sapiens OTUD7B protein protein. 40 0.009
AL590487-4|CAI12651.1| 843|Homo sapiens OTU domain containing 7... 40 0.009
AL122102-1|CAB59268.1| 407|Homo sapiens hypothetical protein pr... 40 0.009
AJ293573-1|CAB97494.1| 858|Homo sapiens zinc finger protein Cez... 40 0.009
AJ430383-1|CAD23047.1| 926|Homo sapiens Cezanne 2 protein protein. 38 0.065
M59465-1|AAA51550.1| 790|Homo sapiens A20 protein. 33 1.4
BC114480-1|AAI14481.1| 790|Homo sapiens tumor necrosis factor, ... 33 1.4
BC113871-1|AAI13872.1| 790|Homo sapiens tumor necrosis factor, ... 33 1.4
AY248754-1|AAO61093.1| 790|Homo sapiens tumor necrosis factor, ... 33 1.4
AL357060-4|CAH72937.1| 790|Homo sapiens tumor necrosis factor, ... 33 1.4
AL157444-1|CAB75664.1| 636|Homo sapiens hypothetical protein pr... 33 1.4
BC119695-1|AAI19696.1| 81|Homo sapiens MOBP protein protein. 32 2.4
BC119694-1|AAI19695.1| 81|Homo sapiens MOBP protein protein. 32 2.4
BC075796-1|AAH75796.1| 81|Homo sapiens MOBP protein protein. 32 2.4
BC022471-1|AAH22471.1| 81|Homo sapiens myelin-associated oligo... 32 2.4
>BC073131-1|AAH73131.1| 213|Homo sapiens zinc finger, AN1-type
domain 5 protein.
Length = 213
Score = 55.6 bits (128), Expect = 2e-07
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3
Query: 528 ERESNPMEALCRSGCXFYGNPSTDGLCSVCFKEALKKKQ 644
E P LC +GC FYGNP T+G+CSVC+KE L+++Q
Sbjct: 4 ETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQ 42
>BC027707-1|AAH27707.1| 213|Homo sapiens ZFAND5 protein protein.
Length = 213
Score = 55.6 bits (128), Expect = 2e-07
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3
Query: 528 ERESNPMEALCRSGCXFYGNPSTDGLCSVCFKEALKKKQ 644
E P LC +GC FYGNP T+G+CSVC+KE L+++Q
Sbjct: 4 ETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQ 42
>BC011018-1|AAH11018.1| 213|Homo sapiens zinc finger, AN1-type
domain 5 protein.
Length = 213
Score = 55.6 bits (128), Expect = 2e-07
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3
Query: 528 ERESNPMEALCRSGCXFYGNPSTDGLCSVCFKEALKKKQ 644
E P LC +GC FYGNP T+G+CSVC+KE L+++Q
Sbjct: 4 ETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQ 42
>AL135924-4|CAD13440.1| 213|Homo sapiens zinc finger, AN1-type
domain 5 protein.
Length = 213
Score = 55.6 bits (128), Expect = 2e-07
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3
Query: 528 ERESNPMEALCRSGCXFYGNPSTDGLCSVCFKEALKKKQ 644
E P LC +GC FYGNP T+G+CSVC+KE L+++Q
Sbjct: 4 ETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQ 42
>AL135924-3|CAI16263.1| 211|Homo sapiens zinc finger, AN1-type
domain 5 protein.
Length = 211
Score = 55.6 bits (128), Expect = 2e-07
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3
Query: 528 ERESNPMEALCRSGCXFYGNPSTDGLCSVCFKEALKKKQ 644
E P LC +GC FYGNP T+G+CSVC+KE L+++Q
Sbjct: 56 ETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQ 94
>AF062347-1|AAC42602.1| 213|Homo sapiens zinc finger protein 216
splice variant 2 protein.
Length = 213
Score = 55.6 bits (128), Expect = 2e-07
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3
Query: 528 ERESNPMEALCRSGCXFYGNPSTDGLCSVCFKEALKKKQ 644
E P LC +GC FYGNP T+G+CSVC+KE L+++Q
Sbjct: 4 ETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQ 42
>AF062346-1|AAC42601.1| 213|Homo sapiens zinc finger protein 216
splice variant 1 protein.
Length = 213
Score = 55.6 bits (128), Expect = 2e-07
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3
Query: 528 ERESNPMEALCRSGCXFYGNPSTDGLCSVCFKEALKKKQ 644
E P LC +GC FYGNP T+G+CSVC+KE L+++Q
Sbjct: 4 ETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQ 42
>AF062072-1|AAC61801.1| 213|Homo sapiens zinc finger protein 216
protein.
Length = 213
Score = 55.6 bits (128), Expect = 2e-07
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3
Query: 528 ERESNPMEALCRSGCXFYGNPSTDGLCSVCFKEALKKKQ 644
E P LC +GC FYGNP T+G+CSVC+KE L+++Q
Sbjct: 4 ETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQ 42
>CR533476-1|CAG38507.1| 208|Homo sapiens AWP1 protein.
Length = 208
Score = 52.4 bits (120), Expect = 2e-06
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 2/41 (4%)
Frame = +3
Query: 525 MERESNPMEA--LCRSGCXFYGNPSTDGLCSVCFKEALKKK 641
M +E+N + LC +GC FYGNP T+G+CSVC+KE L+++
Sbjct: 1 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQ 41
>BC005283-1|AAH05283.1| 208|Homo sapiens zinc finger, AN1-type
domain 6 protein.
Length = 208
Score = 52.4 bits (120), Expect = 2e-06
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 2/41 (4%)
Frame = +3
Query: 525 MERESNPMEA--LCRSGCXFYGNPSTDGLCSVCFKEALKKK 641
M +E+N + LC +GC FYGNP T+G+CSVC+KE L+++
Sbjct: 1 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQ 41
>AJ251095-1|CAC14876.1| 208|Homo sapiens PRK1-associated protein
AWP1 protein.
Length = 208
Score = 52.4 bits (120), Expect = 2e-06
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 2/41 (4%)
Frame = +3
Query: 525 MERESNPMEA--LCRSGCXFYGNPSTDGLCSVCFKEALKKK 641
M +E+N + LC +GC FYGNP T+G+CSVC+KE L+++
Sbjct: 1 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQ 41
>AF261138-1|AAG44674.1| 208|Homo sapiens HT032 protein.
Length = 208
Score = 52.4 bits (120), Expect = 2e-06
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 2/41 (4%)
Frame = +3
Query: 525 MERESNPMEA--LCRSGCXFYGNPSTDGLCSVCFKEALKKK 641
M +E+N + LC +GC FYGNP T+G+CSVC+KE L+++
Sbjct: 1 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQ 41
>AF061739-1|AAD17528.1| 186|Homo sapiens unknown protein.
Length = 186
Score = 52.4 bits (120), Expect = 2e-06
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 2/41 (4%)
Frame = +3
Query: 525 MERESNPMEA--LCRSGCXFYGNPSTDGLCSVCFKEALKKK 641
M +E+N + LC +GC FYGNP T+G+CSVC+KE L+++
Sbjct: 1 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQ 41
>DQ230535-1|ABA64475.1| 407|Homo sapiens RAP1 short isoform
protein.
Length = 407
Score = 44.0 bits (99), Expect = 7e-04
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 549 EALCRSGCXFYGNPSTDGLCSVCFKEALKKKQQ 647
+ LC+ GC +YGNP+ G CS C++E K +Q
Sbjct: 16 DLLCKKGCGYYGNPAWQGFCSKCWREEYHKARQ 48
>DQ230534-1|ABA64474.1| 531|Homo sapiens RAP1 long isoform protein.
Length = 531
Score = 44.0 bits (99), Expect = 7e-04
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 549 EALCRSGCXFYGNPSTDGLCSVCFKEALKKKQQ 647
+ LC+ GC +YGNP+ G CS C++E K +Q
Sbjct: 16 DLLCKKGCGYYGNPAWQGFCSKCWREEYHKARQ 48
>DQ230533-1|ABA64473.1| 491|Homo sapiens RAP1 protein.
Length = 491
Score = 44.0 bits (99), Expect = 7e-04
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 549 EALCRSGCXFYGNPSTDGLCSVCFKEALKKKQQ 647
+ LC+ GC +YGNP+ G CS C++E K +Q
Sbjct: 16 DLLCKKGCGYYGNPAWQGFCSKCWREEYHKARQ 48
>BT007107-1|AAP35771.1| 491|Homo sapiens putative Rab5 GDP/GTP
exchange factor homologue protein.
Length = 491
Score = 44.0 bits (99), Expect = 7e-04
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 549 EALCRSGCXFYGNPSTDGLCSVCFKEALKKKQQ 647
+ LC+ GC +YGNP+ G CS C++E K +Q
Sbjct: 16 DLLCKKGCGYYGNPAWQGFCSKCWREEYHKARQ 48
>BC015330-1|AAH15330.1| 491|Homo sapiens RAB guanine nucleotide
exchange factor (GEF) 1 protein.
Length = 491
Score = 44.0 bits (99), Expect = 7e-04
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 549 EALCRSGCXFYGNPSTDGLCSVCFKEALKKKQQ 647
+ LC+ GC +YGNP+ G CS C++E K +Q
Sbjct: 16 DLLCKKGCGYYGNPAWQGFCSKCWREEYHKARQ 48
>AK223329-1|BAD97049.1| 491|Homo sapiens RAB guanine nucleotide
exchange factor (GEF) 1 variant protein.
Length = 491
Score = 44.0 bits (99), Expect = 7e-04
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 549 EALCRSGCXFYGNPSTDGLCSVCFKEALKKKQQ 647
+ LC+ GC +YGNP+ G CS C++E K +Q
Sbjct: 16 DLLCKKGCGYYGNPAWQGFCSKCWREEYHKARQ 48
>AK127790-1|BAC87138.1| 708|Homo sapiens protein ( Homo sapiens
cDNA FLJ45891 fis, clone OCBBF3022827, highly similar
to Homo sapiens Rab5 GDP/GTP exchange factor (RABEX5).
).
Length = 708
Score = 44.0 bits (99), Expect = 7e-04
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 549 EALCRSGCXFYGNPSTDGLCSVCFKEALKKKQQ 647
+ LC+ GC +YGNP+ G CS C++E K +Q
Sbjct: 154 DLLCKKGCGYYGNPAWQGFCSKCWREEYHKARQ 186
>AJ250042-1|CAB57359.1| 491|Homo sapiens Rab5 GDP/GTP exchange
factor homologue protein.
Length = 491
Score = 44.0 bits (99), Expect = 7e-04
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 549 EALCRSGCXFYGNPSTDGLCSVCFKEALKKKQQ 647
+ LC+ GC +YGNP+ G CS C++E K +Q
Sbjct: 16 DLLCKKGCGYYGNPAWQGFCSKCWREEYHKARQ 48
>AC027644-1|AAQ93362.1| 491|Homo sapiens unknown protein.
Length = 491
Score = 44.0 bits (99), Expect = 7e-04
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 549 EALCRSGCXFYGNPSTDGLCSVCFKEALKKKQQ 647
+ LC+ GC +YGNP+ G CS C++E K +Q
Sbjct: 16 DLLCKKGCGYYGNPAWQGFCSKCWREEYHKARQ 48
>BC072681-1|AAH72681.1| 843|Homo sapiens OTUD7B protein protein.
Length = 843
Score = 40.3 bits (90), Expect = 0.009
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +3
Query: 543 PMEALCRS-GCXFYGNPSTDGLCSVCFKEALKKKQQ 647
P + C+ C FYG+P T+ CS C++E L+++++
Sbjct: 797 PTQTKCKQPNCSFYGHPETNNFCSCCYREELRRRER 832
>AL590487-4|CAI12651.1| 843|Homo sapiens OTU domain containing 7B
protein.
Length = 843
Score = 40.3 bits (90), Expect = 0.009
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +3
Query: 543 PMEALCRS-GCXFYGNPSTDGLCSVCFKEALKKKQQ 647
P + C+ C FYG+P T+ CS C++E L+++++
Sbjct: 797 PTQTKCKQPNCSFYGHPETNNFCSCCYREELRRRER 832
>AL122102-1|CAB59268.1| 407|Homo sapiens hypothetical protein
protein.
Length = 407
Score = 40.3 bits (90), Expect = 0.009
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +3
Query: 543 PMEALCRS-GCXFYGNPSTDGLCSVCFKEALKKKQQ 647
P + C+ C FYG+P T+ CS C++E L+++++
Sbjct: 361 PTQTKCKQPNCSFYGHPETNNFCSCCYREELRRRER 396
>AJ293573-1|CAB97494.1| 858|Homo sapiens zinc finger protein
Cezanne protein.
Length = 858
Score = 40.3 bits (90), Expect = 0.009
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +3
Query: 543 PMEALCRS-GCXFYGNPSTDGLCSVCFKEALKKKQQ 647
P + C+ C FYG+P T+ CS C++E L+++++
Sbjct: 812 PTQTKCKQPNCSFYGHPETNNFCSCCYREELRRRER 847
>AJ430383-1|CAD23047.1| 926|Homo sapiens Cezanne 2 protein protein.
Length = 926
Score = 37.5 bits (83), Expect = 0.065
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 543 PMEALC-RSGCXFYGNPSTDGLCSVCFKEALKKKQQ 647
P++ C R C FYG T+ CS C++E L+++++
Sbjct: 885 PVQRRCQRENCAFYGRAETEHYCSYCYREELRRRRE 920
>M59465-1|AAA51550.1| 790|Homo sapiens A20 protein.
Length = 790
Score = 33.1 bits (72), Expect = 1.4
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 558 CR-SGCXFYGNPSTDGLCSVCFKEALKKK 641
CR +GC ++G P G C++CF E + K
Sbjct: 607 CRKAGCVYFGTPENKGFCTLCFIEYRENK 635
>BC114480-1|AAI14481.1| 790|Homo sapiens tumor necrosis factor,
alpha-induced protein 3 protein.
Length = 790
Score = 33.1 bits (72), Expect = 1.4
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 558 CR-SGCXFYGNPSTDGLCSVCFKEALKKK 641
CR +GC ++G P G C++CF E + K
Sbjct: 607 CRKAGCVYFGTPENKGFCTLCFIEYRENK 635
>BC113871-1|AAI13872.1| 790|Homo sapiens tumor necrosis factor,
alpha-induced protein 3 protein.
Length = 790
Score = 33.1 bits (72), Expect = 1.4
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 558 CR-SGCXFYGNPSTDGLCSVCFKEALKKK 641
CR +GC ++G P G C++CF E + K
Sbjct: 607 CRKAGCVYFGTPENKGFCTLCFIEYRENK 635
>AY248754-1|AAO61093.1| 790|Homo sapiens tumor necrosis factor,
alpha-induced protein 3 protein.
Length = 790
Score = 33.1 bits (72), Expect = 1.4
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 558 CR-SGCXFYGNPSTDGLCSVCFKEALKKK 641
CR +GC ++G P G C++CF E + K
Sbjct: 607 CRKAGCVYFGTPENKGFCTLCFIEYRENK 635
>AL357060-4|CAH72937.1| 790|Homo sapiens tumor necrosis factor,
alpha-induced protein 3 protein.
Length = 790
Score = 33.1 bits (72), Expect = 1.4
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 558 CR-SGCXFYGNPSTDGLCSVCFKEALKKK 641
CR +GC ++G P G C++CF E + K
Sbjct: 607 CRKAGCVYFGTPENKGFCTLCFIEYRENK 635
>AL157444-1|CAB75664.1| 636|Homo sapiens hypothetical protein
protein.
Length = 636
Score = 33.1 bits (72), Expect = 1.4
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 558 CR-SGCXFYGNPSTDGLCSVCFKEALKKK 641
CR +GC ++G P G C++CF E + K
Sbjct: 453 CRKAGCVYFGTPENKGFCTLCFIEYRENK 481
>BC119695-1|AAI19696.1| 81|Homo sapiens MOBP protein protein.
Length = 81
Score = 32.3 bits (70), Expect = 2.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 552 ALCRSGCXFYGNPSTDGLCSVCFKEALKKK 641
++C+SGC FY D +C C K LK+K
Sbjct: 45 SICKSGC-FYQKKEEDWICCACQKTRLKRK 73
>BC119694-1|AAI19695.1| 81|Homo sapiens MOBP protein protein.
Length = 81
Score = 32.3 bits (70), Expect = 2.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 552 ALCRSGCXFYGNPSTDGLCSVCFKEALKKK 641
++C+SGC FY D +C C K LK+K
Sbjct: 45 SICKSGC-FYQKKEEDWICCACQKTRLKRK 73
>BC075796-1|AAH75796.1| 81|Homo sapiens MOBP protein protein.
Length = 81
Score = 32.3 bits (70), Expect = 2.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 552 ALCRSGCXFYGNPSTDGLCSVCFKEALKKK 641
++C+SGC FY D +C C K LK+K
Sbjct: 45 SICKSGC-FYQKKEEDWICCACQKTRLKRK 73
>BC022471-1|AAH22471.1| 81|Homo sapiens myelin-associated
oligodendrocyte basic protein protein.
Length = 81
Score = 32.3 bits (70), Expect = 2.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 552 ALCRSGCXFYGNPSTDGLCSVCFKEALKKK 641
++C+SGC FY D +C C K LK+K
Sbjct: 45 SICKSGC-FYQKKEEDWICCACQKTRLKRK 73
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,263,993
Number of Sequences: 237096
Number of extensions: 1911025
Number of successful extensions: 3393
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 3312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3393
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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