Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_F19
         (858 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0607 + 25437897-25438046,25438180-25438236,25438522-254386...    29   4.7  
05_01_0486 - 4047055-4049013                                           29   4.7  
08_01_0024 + 180749-180872,181826-181880,181936-182025,182075-18...    29   6.3  
03_05_0825 - 27986393-27986767,27987541-27987625,27987936-279880...    28   8.3  
02_05_1082 - 33976038-33978035                                         28   8.3  

>11_06_0607 +
           25437897-25438046,25438180-25438236,25438522-25438602,
           25438720-25438777,25438888-25438991,25439064-25439115,
           25439232-25439281,25440279-25440443,25440531-25440603,
           25440714-25440846,25441146-25441203,25441411-25441458,
           25441593-25441676,25441803-25441868,25442419-25442502
          Length = 420

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 171 DAPKEDNSINTLAESAKKTIEELREKVESALAPETGLXKKNLL 299
           D P     I++  ES    +EEL EK++  L P   L  +N+L
Sbjct: 123 DDPDMAEMIDSEMESLSNQLEELEEKLKLLLLPNDPLDARNIL 165


>05_01_0486 - 4047055-4049013
          Length = 652

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 310 IRWPKRFFFXKPVSGAKADSTFSLNSSIVFFALSASVFML 191
           I+WP R+     + GAK      +NS +V F L+  VF++
Sbjct: 267 IKWPSRWDAYLKMDGAKVHWFSIMNSMMVVFFLAGIVFVI 306


>08_01_0024 +
           180749-180872,181826-181880,181936-182025,182075-182426,
           182913-183000,183162-183294,183394-184089,184305-184368,
           184489-184578
          Length = 563

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = -3

Query: 292 FFFXKPVSGAKADSTFSLNSSIVFFALSASVFMLLSSLGASR 167
           +FF   VS  K++  + L SS V   LS +  +LLSS+G+ R
Sbjct: 43  YFFGGDVSICKSEQDY-LRSSAVADVLSCAYAVLLSSIGSGR 83


>03_05_0825 -
           27986393-27986767,27987541-27987625,27987936-27988036,
           27988144-27988227,27988868-27988939,27989203-27989319,
           27989386-27989526,27989951-27990122,27990324-27990372,
           27990773-27990821,27991240-27991270,27991301-27991371
          Length = 448

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +3

Query: 177 PKEDNSINTLAESAKKTIEELREKVE 254
           PKE ++  T+A + +KT EE+R +++
Sbjct: 91  PKESSTATTMAAATEKTAEEIRRELQ 116


>02_05_1082 - 33976038-33978035
          Length = 665

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -3

Query: 310 IRWPKRFFFXKPVSGAKADSTFSLNSSIVFFALSASVFMLL 188
           I+WP R+     + GAK      LNS +V   L+  VF++L
Sbjct: 279 IKWPSRWDAYLKMEGAKVHWFSILNSLMVIAFLAGIVFVIL 319


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,697,869
Number of Sequences: 37544
Number of extensions: 221821
Number of successful extensions: 393
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 386
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)