Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_F19
         (858 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical pr...    28   9.8  
U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical pr...    28   9.8  

>U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical
           protein F56C9.10b protein.
          Length = 1031

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +3

Query: 180 KEDNSINTLAESAKKTIEELREKVESALAPETGLXKKNLLG 302
           K+D     L E  +K  EE +EKVE  +AP T   +KN+ G
Sbjct: 45  KKDPKPEVLEEVVEKNREEDKEKVEETVAP-TIEKEKNISG 84


>U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical
           protein F56C9.10a protein.
          Length = 1028

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +3

Query: 180 KEDNSINTLAESAKKTIEELREKVESALAPETGLXKKNLLG 302
           K+D     L E  +K  EE +EKVE  +AP T   +KN+ G
Sbjct: 45  KKDPKPEVLEEVVEKNREEDKEKVEETVAP-TIEKEKNISG 84


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,695,916
Number of Sequences: 27780
Number of extensions: 164441
Number of successful extensions: 399
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 397
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)