Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_F18
         (911 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28069-1|AAA86527.1|  144|Drosophila melanogaster cni protein.         35   0.18 
BT011529-1|AAS15665.1|  144|Drosophila melanogaster RE07818p pro...    35   0.18 
AE014134-2698|AAF53522.1|  144|Drosophila melanogaster CG5855-PB...    35   0.18 
AE014134-2697|AAF53521.1|  144|Drosophila melanogaster CG5855-PA...    35   0.18 

>U28069-1|AAA86527.1|  144|Drosophila melanogaster cni protein.
          Length = 144

 Score = 34.7 bits (76), Expect = 0.18
 Identities = 18/56 (32%), Positives = 22/56 (39%)
 Frame = -2

Query: 433 RFXPRPXXXGSGXFDPXSFLXAXVFXXCXXGGWVKXAXXLXXXFXNFXGXXXGLIS 266
           R+  RP   G G +DP + L           GW+K A  L   F    G    LIS
Sbjct: 88  RYKNRPVMSGPGLYDPTTVLKTDTLYRNMREGWIKLAVYLISFFYYIYGMVYSLIS 143


>BT011529-1|AAS15665.1|  144|Drosophila melanogaster RE07818p
           protein.
          Length = 144

 Score = 34.7 bits (76), Expect = 0.18
 Identities = 18/56 (32%), Positives = 22/56 (39%)
 Frame = -2

Query: 433 RFXPRPXXXGSGXFDPXSFLXAXVFXXCXXGGWVKXAXXLXXXFXNFXGXXXGLIS 266
           R+  RP   G G +DP + L           GW+K A  L   F    G    LIS
Sbjct: 88  RYKNRPVMSGPGLYDPTTVLKTDTLYRNMREGWIKLAVYLISFFYYIYGMVYSLIS 143


>AE014134-2698|AAF53522.1|  144|Drosophila melanogaster CG5855-PB,
           isoform B protein.
          Length = 144

 Score = 34.7 bits (76), Expect = 0.18
 Identities = 18/56 (32%), Positives = 22/56 (39%)
 Frame = -2

Query: 433 RFXPRPXXXGSGXFDPXSFLXAXVFXXCXXGGWVKXAXXLXXXFXNFXGXXXGLIS 266
           R+  RP   G G +DP + L           GW+K A  L   F    G    LIS
Sbjct: 88  RYKNRPVMSGPGLYDPTTVLKTDTLYRNMREGWIKLAVYLISFFYYIYGMVYSLIS 143


>AE014134-2697|AAF53521.1|  144|Drosophila melanogaster CG5855-PA,
           isoform A protein.
          Length = 144

 Score = 34.7 bits (76), Expect = 0.18
 Identities = 18/56 (32%), Positives = 22/56 (39%)
 Frame = -2

Query: 433 RFXPRPXXXGSGXFDPXSFLXAXVFXXCXXGGWVKXAXXLXXXFXNFXGXXXGLIS 266
           R+  RP   G G +DP + L           GW+K A  L   F    G    LIS
Sbjct: 88  RYKNRPVMSGPGLYDPTTVLKTDTLYRNMREGWIKLAVYLISFFYYIYGMVYSLIS 143


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,965,544
Number of Sequences: 53049
Number of extensions: 262322
Number of successful extensions: 186
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4464466254
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)