Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_F16
(843 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 33 0.38
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 31 1.1
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 30 2.7
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 2.7
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646... 29 3.5
12_02_0299 - 17051570-17052474,17053542-17053755 26 5.5
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 32.7 bits (71), Expect = 0.38
Identities = 22/72 (30%), Positives = 23/72 (31%), Gaps = 4/72 (5%)
Frame = +3
Query: 558 PXKGGAPPFXXNXPPPGXXXGGXXPPXXXXFXKXGXP----XPXXXKXXXXXXPXPXXPX 725
P +G PPF PPP G PP F P P P P P
Sbjct: 43 PPQGAPPPFLAPPPPP---PPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPY 99
Query: 726 XFFXXXXPPPPP 761
PPPPP
Sbjct: 100 GVNSSQPPPPPP 111
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +2
Query: 620 GGXPPXXGXFXKXGXXPPPXXKXXXXXXPXPXXPPXXFFXXXXPXPP 760
GG PP G PPP + P P P F P PP
Sbjct: 16 GGFPPQPPPMNPYG--PPPPQQPAYGHMPPPQGAPPPFLAPPPPPPP 60
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +3
Query: 558 PXKGGAPPFXXNXPPPGXXXGGXXPPXXXXFXKXGXPXPXXXKXXXXXXPXPXXPXXFFX 737
P G PP + PPP G PP P P P P P
Sbjct: 1124 PLPDGPPPLPLDAPPPPPLPEG-PPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPS---L 1179
Query: 738 XXXPPPPP 761
PPPPP
Sbjct: 1180 PPPPPPPP 1187
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 668 PPPXXKXXXXXXPXPXXPPXXFFXXXXPXPPP 763
PPP + P PP FF P PPP
Sbjct: 53 PPPPPQVIRVFAAAPPPPPAAFFAAVPPPPPP 84
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/60 (28%), Positives = 17/60 (28%)
Frame = +2
Query: 599 PPXXXXXGGXPPXXGXFXKXGXXPPPXXKXXXXXXPXPXXPPXXFFXXXXPXPPPXXLGG 778
PP GG PP PPP P P P P PP GG
Sbjct: 1164 PPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGG 1223
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/65 (30%), Positives = 21/65 (32%)
Frame = +3
Query: 567 GGAPPFXXNXPPPGXXXGGXXPPXXXXFXKXGXPXPXXXKXXXXXXPXPXXPXXFFXXXX 746
GG PP PPP GG P + G P P P P P
Sbjct: 1146 GGVPP-----PPPVGGLGGPPAPPPPAGFRGGTPPP---NAHGGVAPPPPPPRGHGGVGG 1197
Query: 747 PPPPP 761
PP PP
Sbjct: 1198 PPTPP 1202
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = +3
Query: 597 PPPGXXXGGXXPPXXXXFXKXGXPXPXXXKXXXXXXPXPXXPXXFFXXXXPPPPP 761
PPP G PP G P P P P PPPPP
Sbjct: 1099 PPPPSIGAGAPPPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPP 1153
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/60 (28%), Positives = 17/60 (28%)
Frame = +2
Query: 599 PPXXXXXGGXPPXXGXFXKXGXXPPPXXKXXXXXXPXPXXPPXXFFXXXXPXPPPXXLGG 778
PP G PP G PPP P P P PP LGG
Sbjct: 1100 PPPSIGAGAPPPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGG 1159
>04_03_0660 +
18463011-18463322,18463424-18463516,18464500-18464607,
18464892-18465044,18465256-18465354,18465443-18465571,
18465987-18466166,18466208-18466246,18466247-18466363,
18466445-18466609
Length = 464
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +2
Query: 668 PPPXXKXXXXXXPXPXXPPXXFFXXXXPXPPPXXLGG 778
PPP + P P PP P PPP GG
Sbjct: 38 PPPPARHRAPSPPRPPPPPPPPTQPAPPPPPPARSGG 74
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 25.8 bits (54), Expect(2) = 5.5
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +3
Query: 576 PPFXXNXPPPGXXXGGXXPPXXXXFXKXGXPXPXXXKXXXXXXPXPXXPXXFFXXXXPPP 755
PPF PP PP P P P P P F PPP
Sbjct: 237 PPFLPFPLPPIPFLTPPSPPPPAF----PFPLPPWPWAPPPAFPFPHLPPIFSPPSPPPP 292
Query: 756 PP 761
PP
Sbjct: 293 PP 294
Score = 21.4 bits (43), Expect(2) = 5.5
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = +3
Query: 747 PPPPPXXXW 773
PPPPP W
Sbjct: 328 PPPPPSFPW 336
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,739,184
Number of Sequences: 37544
Number of extensions: 388824
Number of successful extensions: 828
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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