Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_F10
(761 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 36 0.008
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.10
SPBC649.04 |uvi15||UV-induced protein Uvi15|Schizosaccharomyces ... 28 1.3
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 1.3
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 2.2
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 26 6.7
SPAC25A8.03c ||SPAC3C7.15c|DUF185 protein|Schizosaccharomyces po... 26 6.7
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 25 8.9
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 35.5 bits (78), Expect = 0.008
Identities = 21/79 (26%), Positives = 23/79 (29%), Gaps = 1/79 (1%)
Frame = +1
Query: 322 FXPPPXGXXXXXXXKKXXXPPPPPXXPPPXGXFLGGXXPXFFXXGGKKXHPP-PPXXGGX 498
F PP PPPPP P P + G+ P PP
Sbjct: 171 FQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPK 230
Query: 499 XFXPXTXKXPPPPXFXXPQ 555
P PPPP PQ
Sbjct: 231 QADPLPAPPPPPPPTLPPQ 249
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.9 bits (69), Expect = 0.10
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +3
Query: 366 KXXXPPPPPXXPPPXGXFSXGXXPPXFFXGXEKXXPPPPXXXGXXFXPXXXKXPPP 533
K PPPP P PP G PPPP G P PPP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGA--GPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +1
Query: 673 PAXXXXGXGGPPPXXPXXPXXXXPPPPP 756
P G PPP P PPPPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 26.2 bits (55), Expect = 5.1
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +1
Query: 367 KXXXPPPPPXXPPPXGXFLGGXXPXFFXXGGKKXHPPPPXXGGXXFXPXTXKXPPPP 537
K PPPP P P GG PPPP G PPPP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGP---PPPPPPPGVAGAGPPPPPPPPP 783
>SPBC649.04 |uvi15||UV-induced protein Uvi15|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 87
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -1
Query: 509 GXKXXPPXXGGGGXXFFPPXKK--XXGXXPPRKXPXGG 402
G PP GG ++PP + G PP+ P GG
Sbjct: 11 GYAPAPPQQAYGGPNYYPPQQNYPQQGYAPPQGYPQGG 48
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 1.3
Identities = 26/101 (25%), Positives = 29/101 (28%), Gaps = 2/101 (1%)
Frame = +2
Query: 461 KKXTPPPPXXGGXXXPPXXKX--PPPXXXFXXHKKXXXPPPPXXKKXFFFFXXXXRGGGX 634
KK PPPP PP + PP + PPPP +G
Sbjct: 308 KKRPPPPP-------PPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSA 360
Query: 635 PXPXXXXFFFFSXPPXXXXGXGGXPPXXXXPXXXWXPPPPP 757
P P PP G PP PP PP
Sbjct: 361 PPPP---------PPRSAPSTGRQPPPLSSSRAVSNPPAPP 392
Score = 27.1 bits (57), Expect = 2.9
Identities = 19/70 (27%), Positives = 20/70 (28%), Gaps = 5/70 (7%)
Frame = +3
Query: 384 PPPXXPPPXGXFSXGXXPPXFFXGXEKXXPPPP-----XXXGXXFXPXXXKXPPPXXXXX 548
PPP PPP + G P PPPP P PPP
Sbjct: 311 PPP--PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRS 368
Query: 549 XTKXQXXPPP 578
PPP
Sbjct: 369 APSTGRQPPP 378
Score = 25.8 bits (54), Expect = 6.7
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 384 PPPXXPPPXGXFSXGXXPPXFFXGXEKXXPPPP 482
PPP PPP S G PP PP P
Sbjct: 361 PPP--PPPRSAPSTGRQPPPLSSSRAVSNPPAP 391
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = +2
Query: 473 PPPPXXGGXXXPPXXKXPPPXXXFXXHKKXXXP 571
PPPP PP PPP + +K P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +1
Query: 469 HPPPPXXGGXXFXPXTXKXPPPPXFXXPQKXK 564
+PPPP P PPPP + +K K
Sbjct: 8 NPPPPPPPPGFEPPSQPPPPPPPGYVKKRKNK 39
Score = 26.2 bits (55), Expect = 5.1
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 691 GXGGPPPXXPXXPXXXXPPPPP 756
G PPP P PPPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPP 28
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +1
Query: 703 PPPXXPXXPXXXXPPPPP 756
PPP P PPPPP
Sbjct: 12 PPPPPGFEPPSQPPPPPP 29
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 25.8 bits (54), Expect = 6.7
Identities = 22/71 (30%), Positives = 22/71 (30%)
Frame = -1
Query: 590 FFXXGGGGXLXFCGXXXXGGGGXFXVXGXKXXPPXXGGGGXXFFPPXKKXXGXXPPRKXP 411
F GGG G GG G F G GGG F G P
Sbjct: 190 FGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGG 249
Query: 410 XGGGXXGGGGG 378
GG GG GG
Sbjct: 250 GLGGFGGGPGG 260
>SPAC25A8.03c ||SPAC3C7.15c|DUF185 protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 467
Score = 25.8 bits (54), Expect = 6.7
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 5 YLIRLTIGNPLRFXHSVTVLEKIRSKCXXNXFPF 106
Y RL G+ HSV VL K KC PF
Sbjct: 76 YYSRLWTGSTNNLSHSVHVLRKEGHKCSKEFDPF 109
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 673 PAXXXXGXGGPPPXXPXXPXXXXPPPP 753
PA G PPP P PPPP
Sbjct: 198 PAHHEPGEHMPPPPMHHKPGEHMPPPP 224
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,134,580
Number of Sequences: 5004
Number of extensions: 37298
Number of successful extensions: 173
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 100
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 365309308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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