Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_E19
(765 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.032
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.032
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.032
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.13
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.13
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.13
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.13
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 33 0.29
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 33 0.29
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 27 0.39
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 27 0.39
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.2
Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.1
U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical pr... 29 3.6
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 3.6
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 3.6
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 3.6
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 28 6.3
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 28 6.3
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 24 7.4
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 28 8.4
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 28 8.4
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 28 8.4
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 28 8.4
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 8.4
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 8.4
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.9 bits (79), Expect = 0.032
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = +3
Query: 432 PPPXXGGPPPXXXXGGGXGPXXXXXXXXXXXXXPPPPXXXXXXXXXXXXXXXXXXXXXPP 611
PPP G PP G P PPPP PP
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
Query: 612 PPPPXXXXP 638
PPPP P
Sbjct: 299 PPPPPRGSP 307
Score = 31.5 bits (68), Expect = 0.68
Identities = 25/91 (27%), Positives = 28/91 (30%)
Frame = -3
Query: 481 PPPXXXXGGGPPXXGGGKXXXPPXKKXGXGXXKXGGGKXXFXXXKKPPXFXGGXNXGXGP 302
PPP G PP G G PP G G PP GG P
Sbjct: 237 PPPPPPPKGSPPLAGSGS--PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG-----SP 289
Query: 301 PPXWGKXDPXIFKSLGAPVLGNFXSXXXGGA 209
PP P G+P G+ GG+
Sbjct: 290 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGS 320
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 529 PPPPPXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXP 639
PPPPP PPPPPPP P
Sbjct: 272 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 308
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 490 GPXPPPXXXXGGGPPXXGGGKXXXPPXKK 404
G PPP GG PP G G PP +K
Sbjct: 310 GSLPPPQA--GGSPPPAGTGSPPPPPRQK 336
Score = 25.0 bits (52), Expect(2) = 2.0
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +3
Query: 213 PPXXFEXKFPKTGAPKLLKIXGSXXPQXGGGPXPKFXPPXXXG 341
PP P TG+P GS P G P P PP G
Sbjct: 266 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP---PPPPRG 305
Score = 23.4 bits (48), Expect(2) = 2.0
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +3
Query: 432 PPPXXGGPPPXXXXGGGXGP 491
PPP GG PP G P
Sbjct: 313 PPPQAGGSPPPAGTGSPPPP 332
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.9 bits (79), Expect = 0.032
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = +3
Query: 432 PPPXXGGPPPXXXXGGGXGPXXXXXXXXXXXXXPPPPXXXXXXXXXXXXXXXXXXXXXPP 611
PPP G PP G P PPPP PP
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
Query: 612 PPPPXXXXP 638
PPPP P
Sbjct: 320 PPPPPRGSP 328
Score = 31.5 bits (68), Expect = 0.68
Identities = 25/91 (27%), Positives = 28/91 (30%)
Frame = -3
Query: 481 PPPXXXXGGGPPXXGGGKXXXPPXKKXGXGXXKXGGGKXXFXXXKKPPXFXGGXNXGXGP 302
PPP G PP G G PP G G PP GG P
Sbjct: 258 PPPPPPPKGSPPLAGSGS--PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG-----SP 310
Query: 301 PPXWGKXDPXIFKSLGAPVLGNFXSXXXGGA 209
PP P G+P G+ GG+
Sbjct: 311 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGS 341
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 529 PPPPPXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXP 639
PPPPP PPPPPPP P
Sbjct: 293 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 329
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 490 GPXPPPXXXXGGGPPXXGGGKXXXPPXKK 404
G PPP GG PP G G PP +K
Sbjct: 331 GSLPPPQA--GGSPPPAGTGSPPPPPRQK 357
Score = 25.0 bits (52), Expect(2) = 1.9
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +3
Query: 213 PPXXFEXKFPKTGAPKLLKIXGSXXPQXGGGPXPKFXPPXXXG 341
PP P TG+P GS P G P P PP G
Sbjct: 287 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP---PPPPRG 326
Score = 23.4 bits (48), Expect(2) = 1.9
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +3
Query: 432 PPPXXGGPPPXXXXGGGXGP 491
PPP GG PP G P
Sbjct: 334 PPPQAGGSPPPAGTGSPPPP 353
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.9 bits (79), Expect = 0.032
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = +3
Query: 432 PPPXXGGPPPXXXXGGGXGPXXXXXXXXXXXXXPPPPXXXXXXXXXXXXXXXXXXXXXPP 611
PPP G PP G P PPPP PP
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
Query: 612 PPPPXXXXP 638
PPPP P
Sbjct: 305 PPPPPRGSP 313
Score = 31.5 bits (68), Expect = 0.68
Identities = 25/91 (27%), Positives = 28/91 (30%)
Frame = -3
Query: 481 PPPXXXXGGGPPXXGGGKXXXPPXKKXGXGXXKXGGGKXXFXXXKKPPXFXGGXNXGXGP 302
PPP G PP G G PP G G PP GG P
Sbjct: 243 PPPPPPPKGSPPLAGSGS--PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG-----SP 295
Query: 301 PPXWGKXDPXIFKSLGAPVLGNFXSXXXGGA 209
PP P G+P G+ GG+
Sbjct: 296 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGS 326
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 529 PPPPPXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXP 639
PPPPP PPPPPPP P
Sbjct: 278 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 314
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 490 GPXPPPXXXXGGGPPXXGGGKXXXPPXKK 404
G PPP GG PP G G PP +K
Sbjct: 316 GSLPPPQA--GGSPPPAGTGSPPPPPRQK 342
Score = 25.0 bits (52), Expect(2) = 1.9
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +3
Query: 213 PPXXFEXKFPKTGAPKLLKIXGSXXPQXGGGPXPKFXPPXXXG 341
PP P TG+P GS P G P P PP G
Sbjct: 272 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP---PPPPRG 311
Score = 23.4 bits (48), Expect(2) = 1.9
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +3
Query: 432 PPPXXGGPPPXXXXGGGXGP 491
PPP GG PP G P
Sbjct: 319 PPPQAGGSPPPAGTGSPPPP 338
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/60 (35%), Positives = 21/60 (35%), Gaps = 3/60 (5%)
Frame = -3
Query: 541 GGGGXXXXXXXXXXXXXGPXPPPXXXXGG---GPPXXGGGKXXXPPXKKXGXGXXKXGGG 371
GGGG G PPP GG G GGG PP G G GGG
Sbjct: 30 GGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGG 89
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -3
Query: 460 GGGPPXXGGGKXXXPPXKKXGXGXXKXGGGKXXFXXXKKPPXFXGGXNXGXG 305
GG GGG PP G G GGG PP GG G G
Sbjct: 36 GGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGG 87
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/60 (35%), Positives = 21/60 (35%), Gaps = 3/60 (5%)
Frame = -3
Query: 541 GGGGXXXXXXXXXXXXXGPXPPPXXXXGG---GPPXXGGGKXXXPPXKKXGXGXXKXGGG 371
GGGG G PPP GG G GGG PP G G GGG
Sbjct: 30 GGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGG 89
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -3
Query: 460 GGGPPXXGGGKXXXPPXKKXGXGXXKXGGGKXXFXXXKKPPXFXGGXNXGXG 305
GG GGG PP G G GGG PP GG G G
Sbjct: 36 GGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGG 87
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.13
Identities = 31/115 (26%), Positives = 32/115 (27%)
Frame = +3
Query: 198 KTLMAPPXXFEXKFPKTGAPKLLKIXGSXXPQXGGGPXPKFXPPXXXGGFFXXKKXXXXX 377
K + PP P T A S P GGP P P GG
Sbjct: 682 KIPLPPPTKMNLSAPSTSAG-----GSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP 736
Query: 378 XXXXXXXXXFXXGGXXFXPPPXXGGPPPXXXXGGGXGPXXXXXXXXXXXXXPPPP 542
GG PP GGPPP GG P PPPP
Sbjct: 737 PITGGPPPPPPPGGL----PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 32.3 bits (70), Expect = 0.39
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +1
Query: 490 PPXXXXXXXXXXXPPPPPXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXP 639
PP PPPPP PPPPPPP P
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 31.9 bits (69), Expect = 0.51
Identities = 24/73 (32%), Positives = 24/73 (32%), Gaps = 1/73 (1%)
Frame = -3
Query: 490 GPXPPPXXXXGGGPPXXGGGKXXXPPXKKXG-XGXXKXGGGKXXFXXXKKPPXFXGGXNX 314
GP PPP GG PP GG PP G PP GG
Sbjct: 725 GPPPPPP--PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
Query: 313 GXGPPPXWGKXDP 275
G PPP G P
Sbjct: 783 GPPPPPPPGMFAP 795
Score = 31.1 bits (67), Expect = 0.90
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 5/61 (8%)
Frame = +1
Query: 478 GGXXPPXXXXXXXXXXXPPPPPXXXXXXXXXXXXXXXXXXXXP-----PPPPPPXXXXPX 642
GG PP PPPPP P PPPPPP P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 643 P 645
P
Sbjct: 771 P 771
Score = 31.1 bits (67), Expect = 0.90
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +1
Query: 475 GGGXXPPXXXXXXXXXXXPPPPPXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXPXP 645
GG PP PPPPP PPPPPPP P P
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGP--------PPPPPPPGGCPPPP 772
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.13
Identities = 31/115 (26%), Positives = 32/115 (27%)
Frame = +3
Query: 198 KTLMAPPXXFEXKFPKTGAPKLLKIXGSXXPQXGGGPXPKFXPPXXXGGFFXXKKXXXXX 377
K + PP P T A S P GGP P P GG
Sbjct: 682 KIPLPPPTKMNLSAPSTSAG-----GSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP 736
Query: 378 XXXXXXXXXFXXGGXXFXPPPXXGGPPPXXXXGGGXGPXXXXXXXXXXXXXPPPP 542
GG PP GGPPP GG P PPPP
Sbjct: 737 PITGGPPPPPPPGGL----PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 32.3 bits (70), Expect = 0.39
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +1
Query: 490 PPXXXXXXXXXXXPPPPPXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXP 639
PP PPPPP PPPPPPP P
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 31.9 bits (69), Expect = 0.51
Identities = 24/73 (32%), Positives = 24/73 (32%), Gaps = 1/73 (1%)
Frame = -3
Query: 490 GPXPPPXXXXGGGPPXXGGGKXXXPPXKKXG-XGXXKXGGGKXXFXXXKKPPXFXGGXNX 314
GP PPP GG PP GG PP G PP GG
Sbjct: 725 GPPPPPP--PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
Query: 313 GXGPPPXWGKXDP 275
G PPP G P
Sbjct: 783 GPPPPPPPGMFAP 795
Score = 31.1 bits (67), Expect = 0.90
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 5/61 (8%)
Frame = +1
Query: 478 GGXXPPXXXXXXXXXXXPPPPPXXXXXXXXXXXXXXXXXXXXP-----PPPPPPXXXXPX 642
GG PP PPPPP P PPPPPP P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 643 P 645
P
Sbjct: 771 P 771
Score = 31.1 bits (67), Expect = 0.90
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +1
Query: 475 GGGXXPPXXXXXXXXXXXPPPPPXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXPXP 645
GG PP PPPPP PPPPPPP P P
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGP--------PPPPPPPGGCPPPP 772
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.13
Identities = 31/115 (26%), Positives = 32/115 (27%)
Frame = +3
Query: 198 KTLMAPPXXFEXKFPKTGAPKLLKIXGSXXPQXGGGPXPKFXPPXXXGGFFXXKKXXXXX 377
K + PP P T A S P GGP P P GG
Sbjct: 265 KIPLPPPTKMNLSAPSTSAG-----GSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP 319
Query: 378 XXXXXXXXXFXXGGXXFXPPPXXGGPPPXXXXGGGXGPXXXXXXXXXXXXXPPPP 542
GG PP GGPPP GG P PPPP
Sbjct: 320 PITGGPPPPPPPGGL----PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 32.3 bits (70), Expect = 0.39
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +1
Query: 490 PPXXXXXXXXXXXPPPPPXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXP 639
PP PPPPP PPPPPPP P
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 378
Score = 31.9 bits (69), Expect = 0.51
Identities = 24/73 (32%), Positives = 24/73 (32%), Gaps = 1/73 (1%)
Frame = -3
Query: 490 GPXPPPXXXXGGGPPXXGGGKXXXPPXKKXG-XGXXKXGGGKXXFXXXKKPPXFXGGXNX 314
GP PPP GG PP GG PP G PP GG
Sbjct: 308 GPPPPPP--PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 365
Query: 313 GXGPPPXWGKXDP 275
G PPP G P
Sbjct: 366 GPPPPPPPGMFAP 378
Score = 31.1 bits (67), Expect = 0.90
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 5/61 (8%)
Frame = +1
Query: 478 GGXXPPXXXXXXXXXXXPPPPPXXXXXXXXXXXXXXXXXXXXP-----PPPPPPXXXXPX 642
GG PP PPPPP P PPPPPP P
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Query: 643 P 645
P
Sbjct: 354 P 354
Score = 31.1 bits (67), Expect = 0.90
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +1
Query: 475 GGGXXPPXXXXXXXXXXXPPPPPXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXPXP 645
GG PP PPPPP PPPPPPP P P
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGP--------PPPPPPPGGCPPPP 355
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +1
Query: 478 GGXXPPXXXXXXXXXXXPPPPPXXXXXXXXXXXXXXXXXXXXPPPPPPP 624
G PP PPPPP PPPPPPP
Sbjct: 534 GAPTPPPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPP 582
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +1
Query: 475 GGGXXPPXXXXXXXXXXXPPPPPXXXXXXXXXXXXXXXXXXXXPPPPPPP 624
G PP PPPPP PPPPPPP
Sbjct: 534 GAPTPPPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPP 583
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = +3
Query: 432 PPPXXGGPPP--XXXXGGGXGPXXXXXXXXXXXXXPPPP 542
PPP GPPP GGG GP PPPP
Sbjct: 28 PPPQCCGPPPACGNPCGGGFGPPPPPFGPVGYALPPPPP 66
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 27.1 bits (57), Expect(2) = 0.39
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +1
Query: 529 PPPPPXXXXXXXXXXXXXXXXXXXXPPPPPP 621
PPPPP PPPPPP
Sbjct: 769 PPPPPPHCEPTMVHVEFTPPSTSSVPPPPPP 799
Score = 23.8 bits (49), Expect(2) = 0.39
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 604 PPPPPPP 624
PPPPPPP
Sbjct: 810 PPPPPPP 816
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 27.1 bits (57), Expect(2) = 0.39
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +1
Query: 529 PPPPPXXXXXXXXXXXXXXXXXXXXPPPPPP 621
PPPPP PPPPPP
Sbjct: 769 PPPPPPHCEPTMVHVEFTPPSTSSVPPPPPP 799
Score = 23.8 bits (49), Expect(2) = 0.39
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 604 PPPPPPP 624
PPPPPPP
Sbjct: 810 PPPPPPP 816
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +1
Query: 490 PPXXXXXXXXXXXPPPPPXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXPXP 645
PP PPP P PPPPPPP P P
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPP 78
>Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical
protein T22A3.5 protein.
Length = 790
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 529 PPPPPXXXXXXXXXXXXXXXXXXXXPPPPPPP 624
PPPPP PPPPPPP
Sbjct: 725 PPPPPQFFPMIGGPPLMHPTFSTSAPPPPPPP 756
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/91 (27%), Positives = 25/91 (27%), Gaps = 2/91 (2%)
Frame = -3
Query: 637 GXXXXGGGGGGXXXXXXXXXXXXXXXXXXXXXGGGGXXXXXXXXXXXXXGPXPPP--XXX 464
G GGGGG GGGG P PPP
Sbjct: 62 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGG 121
Query: 463 XGGGPPXXGGGKXXXPPXKKXGXGXXKXGGG 371
GGG GGG G G GGG
Sbjct: 122 CGGGGGGCGGGCGGGGGGGCGGGGGGGCGGG 152
Score = 29.1 bits (62), Expect = 3.6
Identities = 25/84 (29%), Positives = 25/84 (29%), Gaps = 2/84 (2%)
Frame = -3
Query: 541 GGGGXXXXXXXXXXXXXGPXPPP--XXXXGGGPPXXGGGKXXXPPXKKXGXGXXKXGGGK 368
GGGG P PPP GGG GGG G G GGG
Sbjct: 37 GGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGG 96
Query: 367 XXFXXXKKPPXFXGGXNXGXGPPP 296
GG G PPP
Sbjct: 97 GGCGG-------GGGCGGGCAPPP 113
Score = 28.7 bits (61), Expect = 4.8
Identities = 24/89 (26%), Positives = 24/89 (26%)
Frame = -3
Query: 637 GXXXXGGGGGGXXXXXXXXXXXXXXXXXXXXXGGGGXXXXXXXXXXXXXGPXPPPXXXXG 458
G GG GGG GGGG G G
Sbjct: 41 GCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCG 100
Query: 457 GGPPXXGGGKXXXPPXKKXGXGXXKXGGG 371
GG GGG PP G G GGG
Sbjct: 101 GGG-GCGGGCAPPPPPPACGGGCGGGGGG 128
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 529 PPPPPXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXPXP 645
P PPP PPPPPPP P P
Sbjct: 272 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP 310
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 529 PPPPPXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXPXP 645
P PPP PPPPPPP P P
Sbjct: 282 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP 320
>U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical
protein F47B3.4 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 604 PPPPPPPXXXXPXPKK 651
PPPPPPP P P K
Sbjct: 52 PPPPPPPAPKVPEPPK 67
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/64 (31%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Frame = -3
Query: 487 PXPPPXXXXGGGPPXXGGGKXXXPPXKKXGXGXXKXG--GGKXXFXXXKKPPXFXGGXNX 314
P PP GGG P G PP G G GG PP GG
Sbjct: 151 PTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGG 210
Query: 313 GXGP 302
GP
Sbjct: 211 PGGP 214
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/64 (31%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Frame = -3
Query: 487 PXPPPXXXXGGGPPXXGGGKXXXPPXKKXGXGXXKXG--GGKXXFXXXKKPPXFXGGXNX 314
P PP GGG P G PP G G GG PP GG
Sbjct: 431 PTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGG 490
Query: 313 GXGP 302
GP
Sbjct: 491 PGGP 494
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/65 (32%), Positives = 22/65 (33%), Gaps = 1/65 (1%)
Frame = -3
Query: 487 PXPPPXXXXGGGPPXXGGGKXXXPPXKKXGXGXXKXGGGKXXFXXXKKPPX-FXGGXNXG 311
P PP PP G PP G + G F K PP F G N G
Sbjct: 696 PGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQ-GIPPMGFDPNKPPPPMFQQGFNAG 754
Query: 310 XGPPP 296
PPP
Sbjct: 755 APPPP 759
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 604 PPPPPPPXXXXPXPKKK 654
PPPPPPP P P+ +
Sbjct: 97 PPPPPPPTQPEPEPEPR 113
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = -2
Query: 644 GXGXXXXGGGGGGGXXXXXXXXXXXXXXXXXXXXGGGGGXXXXXXXXXXXGG 489
G G GGGGGGG GGGGG GG
Sbjct: 830 GYGGGYGGGGGGGGGGGGGSYHQPYNQDQRRGGRGGGGGPPGYQRPPYRGGG 881
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 23.8 bits (49), Expect(2) = 7.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 604 PPPPPPP 624
PPPPPPP
Sbjct: 155 PPPPPPP 161
Score = 22.6 bits (46), Expect(2) = 7.4
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 607 PPPPPPXXXXPXPKKKK 657
PPPPPP P +++
Sbjct: 173 PPPPPPAQQKPSSDREQ 189
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 27.9 bits (59), Expect = 8.4
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 604 PPPPPPPXXXXPXPK 648
PPPPPPP P P+
Sbjct: 357 PPPPPPPPPPPPPPQ 371
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -2
Query: 644 GXGXXXXGGGGGGGXXXXXXXXXXXXXXXXXXXXGGGGG 528
G G GGGGGGG GGGGG
Sbjct: 88 GNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGG 126
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 529 PPPPPXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXPXP 645
PPPPP PPPPPPP P P
Sbjct: 67 PPPPPPPPPLISILQQAPPP-----PPPPPPPTLKAPPP 100
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 27.9 bits (59), Expect = 8.4
Identities = 24/100 (24%), Positives = 24/100 (24%)
Frame = -3
Query: 637 GXXXXGGGGGGXXXXXXXXXXXXXXXXXXXXXGGGGXXXXXXXXXXXXXGPXPPPXXXXG 458
G GGGGGG GGGG GP PP
Sbjct: 94 GGAVGGGGGGGYGGGHGGGHGGAVGGGYGGGGGGGGGCQCSPSSNTCPPGPRGPPGQAGL 153
Query: 457 GGPPXXGGGKXXXPPXKKXGXGXXKXGGGKXXFXXXKKPP 338
G P G G GG K PP
Sbjct: 154 DGLPGAPGQPGSNGGAGSNGASEGSAGGCKTCPAGPPGPP 193
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/56 (26%), Positives = 15/56 (26%)
Frame = +1
Query: 478 GGXXPPXXXXXXXXXXXPPPPPXXXXXXXXXXXXXXXXXXXXPPPPPPPXXXXPXP 645
GG PP PPP PPP PPP P P
Sbjct: 1557 GGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGPPP 1612
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Frame = +3
Query: 432 PPPXXGGPPPXXXXGGG-XGP 491
PPP GGPPP GG GP
Sbjct: 582 PPPMLGGPPPPPPPPGGLMGP 602
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,605,424
Number of Sequences: 27780
Number of extensions: 360557
Number of successful extensions: 5265
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2021
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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