Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_E18
         (767 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       32   0.44 
12_02_0299 - 17051570-17052474,17053542-17053755                       31   1.3  
05_01_0142 - 940421-940701,941262-941574                               29   3.1  
04_03_0513 - 16681227-16683936,16685572-16685966                       29   3.1  
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           29   3.1  
01_01_0082 + 625198-625719                                             29   5.4  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 19/53 (35%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
 Frame = +1

Query: 514 PXPFXPPXXFXXPXPXKKXXFPPXXXGPPXGXXXKKXGGPPXXKXXG--GGXP 666
           P P  PP     P P K    PP   GPP     K    PP     G  GG P
Sbjct: 326 PPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPP 378



 Score = 30.3 bits (65), Expect = 1.8
 Identities = 22/61 (36%), Positives = 22/61 (36%)
 Frame = +1

Query: 475 PGKFFXPPXXXFXPXPFXPPXXFXXPXPXKKXXFPPXXXGPPXGXXXKKXGGPPXXKXXG 654
           P K   PP     P P  P      P P K    PP    PP G    K GGPP     G
Sbjct: 331 PPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPP--PPGG----KKGGPPPPPPKG 384

Query: 655 G 657
           G
Sbjct: 385 G 385


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/49 (34%), Positives = 18/49 (36%)
 Frame = +1

Query: 454 LPQILXXPGKFFXPPXXXFXPXPFXPPXXFXXPXPXKKXXFPPXXXGPP 600
           LP     P  +  PP     P P  PP  F  P P     FPP    PP
Sbjct: 307 LPHFPPLPSFYPSPPPPPPPPPP--PPPSFPWPFPPLAPLFPPYPSPPP 353


>05_01_0142 - 940421-940701,941262-941574
          Length = 197

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 18/59 (30%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
 Frame = +1

Query: 493 PPXXXFXPXPFXPPXXFXXPXPXKKXXFPPXXXGPPXGXXXKKXGGP-PXXKXXGGGXP 666
           PP   + P  + PP     P P      PP    PP G    + G P P      GG P
Sbjct: 30  PPHQGYPPQGYPPPPGAYPPPPGAYPP-PPGAYPPPPGAYPPQHGYPQPGGYPPPGGYP 87


>04_03_0513 - 16681227-16683936,16685572-16685966
          Length = 1034

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +2

Query: 272  QQGLLHKHESLRKFHDDVQGRIPSQEFGILDLL 370
            Q G+LH+ ESL    +D+ G IP QE   LD L
Sbjct: 905  QLGMLHQLESLDLSSNDLSGEIP-QELASLDFL 936


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 17/48 (35%), Positives = 18/48 (37%)
 Frame = +1

Query: 514 PXPFXPPXXFXXPXPXKKXXFPPXXXGPPXGXXXKKXGGPPXXKXXGG 657
           P P  PP     P P      PP    PP G   +  GGPP     GG
Sbjct: 349 PPPPPPPAAPAAPRPPGPGPGPP----PPPGAAGRGGGGPPPPALPGG 392


>01_01_0082 + 625198-625719
          Length = 173

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/46 (28%), Positives = 18/46 (39%)
 Frame = +1

Query: 457 PQILXXPGKFFXPPXXXFXPXPFXPPXXFXXPXPXKKXXFPPXXXG 594
           P +L  P  ++ PP   + P P  PP  +  P        PP   G
Sbjct: 56  PDVLPTP-VYYPPPPPVYYPPPSPPPVAYPPPTTPSTNCPPPPYGG 100


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,313,099
Number of Sequences: 37544
Number of extensions: 423840
Number of successful extensions: 705
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)