Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_E17
(896 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_1033 - 8080179-8080685 46 5e-05
07_01_0793 - 6169661-6169936,6170942-6171025,6171473-6171590,617... 42 7e-04
02_05_0651 + 30644241-30644615,30644751-30644858 41 0.002
02_04_0020 - 18956282-18956461,18956591-18956740,18957934-189580... 38 0.014
11_06_0207 + 21214631-21216121 31 1.2
03_05_0388 + 23726957-23727418,23730016-23730262,23731072-237312... 31 1.2
08_02_0526 + 18184146-18184168,18184247-18184438,18184846-181849... 30 2.2
11_06_0656 + 25926192-25926289,25927530-25927659,25928248-259282... 29 3.8
09_02_0343 + 7514514-7514948 29 5.0
09_02_0136 + 4747985-4748419 29 5.0
07_03_0131 - 14004278-14004712 29 5.0
03_01_0245 + 1916718-1917443,1917534-1917719 29 6.6
06_01_0197 - 1525945-1526622 28 8.8
04_03_0797 + 19744815-19745030,19745190-19745273,19745375-197454... 28 8.8
02_05_1142 - 34391144-34391590,34391715-34391904,34392058-343921... 28 8.8
>06_01_1033 - 8080179-8080685
Length = 168
Score = 45.6 bits (103), Expect = 5e-05
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = +1
Query: 544 GGVEPEEEPSVTAMREVLEEAGVIGKLGRCLG--VFENREHKHRTE--VYVMTVXQELXE 711
GG E +E A RE LEEAGV+G++G LG + +R + E V+ + V EL
Sbjct: 63 GGWELDESVDEAARREALEEAGVLGEIGASLGRWCYRSRRYDATYEGFVFPLRVTDELDR 122
Query: 712 WEDSRLMGRKRQW 750
W + + R+R W
Sbjct: 123 WPE--MAARRRSW 133
>07_01_0793 -
6169661-6169936,6170942-6171025,6171473-6171590,
6172917-6172987
Length = 182
Score = 41.9 bits (94), Expect = 7e-04
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Frame = +1
Query: 544 GGVEPEEEPSVTAMREVLEEAGVIGKLGRCLGVFENREHKH----------RTEVYVMTV 693
GG E +E A RE +EEAGV G L + LG ++ + H R V+ + V
Sbjct: 64 GGWENDETVEEAAAREAIEEAGVRGDLVQLLGFYDFKSKTHQDKFCPEGMCRAAVFALRV 123
Query: 694 XQELXEWEDSRLMGRKRQWSPL 759
+EL W + RKR W L
Sbjct: 124 KEELASWPEQST--RKRTWLTL 143
>02_05_0651 + 30644241-30644615,30644751-30644858
Length = 160
Score = 40.7 bits (91), Expect = 0.002
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 544 GGVEPEEEPSVTAMREVLEEAGVIGKLGRCLGVFENREHKHRTE----VYVMTVXQELXE 711
GG E +E A RE LEEAGV G LG + + ++ T ++ + V EL +
Sbjct: 55 GGWELDESMDEAARREALEEAGVRGDTETSLGCWYYKSRRYDTTYEGFMFPLRVTDELLQ 114
Query: 712 WEDSRLMGRKRQWS 753
W + + RKR W+
Sbjct: 115 WPE--MSSRKRTWA 126
Score = 30.3 bits (65), Expect = 2.2
Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 4/102 (3%)
Frame = +3
Query: 393 MVKEKPNSIRIYDDEGFRRRAACIC--VRSDAETEVLLVTSSRRPDNWIVPGGGSRAGRG 566
+V + ++ Y G R CI VRS E EVL++T S++ + P GG
Sbjct: 4 LVARQGRELQRYTSAGGRIVVGCIPYRVRSGGEMEVLVIT-SQKGHGMMFPKGGWELDES 62
Query: 567 --AFCHCDAGGT*GSRSDRETRTMSWSIREPRTQTPNRGLCY 686
+A G R D ET W + R T G +
Sbjct: 63 MDEAARREALEEAGVRGDTETSLGCWYYKSRRYDTTYEGFMF 104
>02_04_0020 -
18956282-18956461,18956591-18956740,18957934-18958017,
18958283-18958403,18958525-18958604
Length = 204
Score = 37.5 bits (83), Expect = 0.014
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 11/77 (14%)
Frame = +1
Query: 544 GGVEPEEEPSVTAMREVLEEAGVIGKLGR-CLG--VFENREHKHRTE--------VYVMT 690
GG E +EE A RE +EEAGV G + R LG VF+++ ++ + ++ M
Sbjct: 68 GGWEDDEEVYEAASREAMEEAGVKGIVNRTTLGHWVFKSKSSQNSSSPRGACKGYIFAME 127
Query: 691 VXQELXEWEDSRLMGRK 741
V +EL W + GR+
Sbjct: 128 VTEELESWPEQATHGRR 144
>11_06_0207 + 21214631-21216121
Length = 496
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 393 MVKEKPNSIRIYDDEGFRRRAACICVRSDAETEVLLVTSSRRPDNWIVPGG 545
++K P I ++D E RR+ + S + V + S + D W VP G
Sbjct: 422 LIKNGPRDIGVFDLENRRRKKTISPIWSSWPSPVWITPSIAKADGWCVPCG 472
>03_05_0388 +
23726957-23727418,23730016-23730262,23731072-23731220,
23731313-23731597,23731665-23731889,23734251-23734445
Length = 520
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 635 RHRPSFPITPASSSTSRI--AVTEGSSSGSTPPARHNPVVGPSR 510
+ P PI+PA R+ +T+GS S P R+ VGP+R
Sbjct: 160 KDEPDAPISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTR 203
>08_02_0526 +
18184146-18184168,18184247-18184438,18184846-18184954,
18185071-18185220,18185973-18186136,18186273-18186359,
18187083-18187137,18187911-18188333
Length = 400
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -1
Query: 611 TPASSSTSRIAVTEGSSSGSTPPARHNPVVGPSRRRH 501
TP STSR + S S S PP R + P RRH
Sbjct: 30 TPVRRSTSRSPPPKKSDSRSPPPRRRSTSRSPRPRRH 66
>11_06_0656 +
25926192-25926289,25927530-25927659,25928248-25928294,
25929274-25929388,25929504-25929753,25930079-25930239,
25930372-25930567,25930672-25930836,25930918-25931070,
25931160-25931248,25931385-25931423,25931460-25931681,
25933503-25934165
Length = 775
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 635 RHRPSFPITPASSSTSRIAVTEGSSSG 555
R RP+ P+TPAS R+A G S G
Sbjct: 576 RRRPTPPLTPASPPLERVASKAGGSRG 602
>09_02_0343 + 7514514-7514948
Length = 144
Score = 29.1 bits (62), Expect = 5.0
Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = +3
Query: 543 GGSRAGRGAFCHCDAGGT*GS---RSDRETRTMSWSIREPR-TQTPNRGL 680
G RA RG HCDAGG G+ RS E R R +T RGL
Sbjct: 83 GKRRASRGRRGHCDAGGGDGATGWRSGEEGEAAGGGRRHGRERRTAGRGL 132
>09_02_0136 + 4747985-4748419
Length = 144
Score = 29.1 bits (62), Expect = 5.0
Identities = 21/50 (42%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = +3
Query: 543 GGSRAGRGAFCHCDAG---GT*GSRSDRETRTMSWSIREPR-TQTPNRGL 680
G RA RG HCDAG G G RS E R R +T RGL
Sbjct: 83 GKRRASRGRGGHCDAGGGDGATGRRSGEEGEAAGGGRRHGRERRTAGRGL 132
>07_03_0131 - 14004278-14004712
Length = 144
Score = 29.1 bits (62), Expect = 5.0
Identities = 21/50 (42%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = +3
Query: 543 GGSRAGRGAFCHCDAG---GT*GSRSDRETRTMSWSIREPR-TQTPNRGL 680
G RA RG HCDAG G G RS E R R +T RGL
Sbjct: 83 GKRRASRGRGGHCDAGGGDGATGRRSGEEGEAAGGGRRHGRERRTAGRGL 132
>03_01_0245 + 1916718-1917443,1917534-1917719
Length = 303
Score = 28.7 bits (61), Expect = 6.6
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Frame = +3
Query: 579 CDAGGT*GSRSDRETRTMSWSIREPRT-QTPNRGLCYDCXPRTXRVGGFKTHGT*EAMVS 755
C +GG G + R + + S R PRT +TP C P R+ G ++ V
Sbjct: 70 CGSGGGGGDNNLRGRSSTTTSARTPRTPKTP-------CTPTARRLCGVRSRTPRRGQVG 122
Query: 756 IDDALAXLALHKPISVTTFNNCVV 827
+ A A P + TT C V
Sbjct: 123 CFQSSAPAAARTPRTPTTQRACYV 146
>06_01_0197 - 1525945-1526622
Length = 225
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 600 GSRSDRETRTMSWSIREPRTQTPNRGLCY 686
G R R R +S+S+R PRT P RG+ +
Sbjct: 136 GLRPPRALRRLSYSLRCPRTGGPARGVVH 164
>04_03_0797 +
19744815-19745030,19745190-19745273,19745375-19745473,
19745588-19745695,19747332-19747700
Length = 291
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 544 GGVEPEEEPSVTAMREVLEEAGVIGKL 624
GG E +E+ A RE +EEAGV G +
Sbjct: 73 GGWEDDEDVYEAACREAMEEAGVKGNI 99
>02_05_1142 -
34391144-34391590,34391715-34391904,34392058-34392128,
34392403-34392515,34392656-34392749,34392843-34392908,
34393120-34393282,34393441-34393547,34393918-34394115,
34394204-34394329,34394800-34394904,34395056-34395098,
34395334-34395391,34395479-34395659,34395751-34395917,
34396010-34396249,34396341-34396781,34397147-34397272,
34397457-34397561,34397935-34398002,34398169-34398272,
34398856-34399008,34399472-34399570,34399919-34400046,
34400149-34400300,34400423-34400502
Length = 1274
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 559 EEEPSVTAMREVLEEAGV-IGKLGRCLGVFENREHKHRTEVYVMT 690
+EE A+REVLEE G + KL + E + R +Y++T
Sbjct: 143 DEEDHTCAVREVLEETGCDVSKLLKLEDYIEVSMWQQRVRLYIIT 187
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,641,912
Number of Sequences: 37544
Number of extensions: 486684
Number of successful extensions: 1705
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1700
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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