Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_E17
         (896 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084268-2|AAL16324.1|  150|Caenorhabditis elegans Hypothetical ...    63   3e-10
U42439-3|AAA83507.1|  310|Caenorhabditis elegans Hypothetical pr...    31   0.85 
Z72511-3|CAA96657.1|  610|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>AC084268-2|AAL16324.1|  150|Caenorhabditis elegans Hypothetical
           protein Y92H12BL.5 protein.
          Length = 150

 Score = 62.9 bits (146), Expect = 3e-10
 Identities = 29/69 (42%), Positives = 46/69 (66%)
 Frame = +1

Query: 544 GGVEPEEEPSVTAMREVLEEAGVIGKLGRCLGVFENREHKHRTEVYVMTVXQELXEWEDS 723
           GG+E +E     A RE++EEAGV   + + +G+F++   KHRT+V++M V +EL  WE++
Sbjct: 58  GGIEKDECAEEAAHRELMEEAGVRATILKKIGMFQDDVRKHRTQVFLMEVSEELQTWEEN 117

Query: 724 RLMGRKRQW 750
              GR+R W
Sbjct: 118 E-YGRQRIW 125



 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
 Frame = +3

Query: 390 KMVKEKPNSIRIYDDEGFRRRAACICVR-SDAETEVLLVTSSRRPDNWIVPGGG 548
           K  + + N +R+ D +GFR RAA +C++ +  ET VLLV+  +    W+VPGGG
Sbjct: 6   KSRESERNKVRLRDTDGFRIRAAALCIKGTGKETLVLLVSGGKDGGKWVVPGGG 59


>U42439-3|AAA83507.1|  310|Caenorhabditis elegans Hypothetical
           protein F19C7.3 protein.
          Length = 310

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
 Frame = -2

Query: 244 FSTIKLHNVHKKS--NYNNNKTTIRAMF*L*LAFDRIFQA-HVE---RPDVFFLRGKSKI 83
           ++T KL N+HKKS  N+NN+K  +  +      FD +F   HV+     D  F R +S I
Sbjct: 71  YNTTKLDNIHKKSIFNFNNSKKCLTLL----TRFDDLFSIDHVDLIINTDKLFGRYRSTI 126

Query: 82  R 80
           R
Sbjct: 127 R 127


>Z72511-3|CAA96657.1|  610|Caenorhabditis elegans Hypothetical
           protein F55A11.3 protein.
          Length = 610

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -1

Query: 608 PASSSTSRIAVTEGSSSGSTPPARHNPVVGPS 513
           PA+SS   I  TE  S+ ST P+  +PV   S
Sbjct: 549 PATSSAPSIFRTESPSTSSTAPSTSSPVTASS 580


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,301,524
Number of Sequences: 27780
Number of extensions: 407419
Number of successful extensions: 1404
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1400
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)