Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_E10
(1094 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 36 0.039
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 35 0.12
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 27 0.60
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 32 0.83
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 32 0.83
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 3.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 3.3
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 3.3
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 3.3
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 3.3
U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog (hedg... 29 4.4
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 5.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 5.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 5.8
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 5.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 5.8
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 7.7
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 7.7
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 7.7
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 7.7
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 36.3 bits (80), Expect = 0.039
Identities = 24/74 (32%), Positives = 25/74 (33%), Gaps = 3/74 (4%)
Frame = -1
Query: 671 KXPPPPXXXPPXXXKKKNXFFFXXXPPXFXXPPKKXXGGGGXXPPFFFXXGXKKPXGGGG 492
K PP PP K FF P PP GG PP F P GG
Sbjct: 44 KQAPPSGILPPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGG 103
Query: 491 V---XKXFFXPPPP 459
+ F PPPP
Sbjct: 104 IPPPPPMFGAPPPP 117
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 34.7 bits (76), Expect = 0.12
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +2
Query: 449 FXXLGGXGXKKXXXXPPPPXVFXPPX*KKKGGXXPPPP 562
F GG G PPPP PP GG PPPP
Sbjct: 19 FPSAGGGGGGCGCGAPPPPPACAPPPAPACGGGAPPPP 56
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical protein
F15B9.4 protein.
Length = 1140
Score = 27.1 bits (57), Expect(2) = 0.60
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +1
Query: 925 PPPXXXXFFFXKKKXKXXPPPXXXFXXXXXXPPPPPP 1035
PPP PPP PPPPPP
Sbjct: 520 PPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPP 556
Score = 23.8 bits (49), Expect(2) = 0.60
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 1018 PPPPPPP 1038
PPPPPPP
Sbjct: 579 PPPPPPP 585
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 31.9 bits (69), Expect = 0.83
Identities = 23/69 (33%), Positives = 23/69 (33%)
Frame = -1
Query: 665 PPPPXXXPPXXXKKKNXFFFXXXPPXFXXPPKKXXGGGGXXPPFFFXXGXKKPXGGGGVX 486
PPP PP F PP F PP G PP F GG
Sbjct: 298 PPPRGHFPPPPPH----FMGRGMPPPFMPPPPHF----GMGPPRGFMPPPHPMMFRGGPY 349
Query: 485 KXFFXPPPP 459
FF PPPP
Sbjct: 350 PPFFPPPPP 358
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +3
Query: 495 PPPRGFFXPXXKKKRGXXPPPPXXFFWGG 581
PPP GFF P RG PPPP F G
Sbjct: 290 PPPFGFFPP---PPRGHFPPPPPHFMGRG 315
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 31.9 bits (69), Expect = 0.83
Identities = 23/69 (33%), Positives = 23/69 (33%)
Frame = -1
Query: 665 PPPPXXXPPXXXKKKNXFFFXXXPPXFXXPPKKXXGGGGXXPPFFFXXGXKKPXGGGGVX 486
PPP PP F PP F PP G PP F GG
Sbjct: 298 PPPRGHFPPPPPH----FMGRGMPPPFMPPPPHF----GMGPPRGFMPPPHPMMFRGGPY 349
Query: 485 KXFFXPPPP 459
FF PPPP
Sbjct: 350 PPFFPPPPP 358
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +3
Query: 495 PPPRGFFXPXXKKKRGXXPPPPXXFFWGG 581
PPP GFF P RG PPPP F G
Sbjct: 290 PPPFGFFPP---PPRGHFPPPPPHFMGRG 315
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +2
Query: 494 PPPPXVFXPPX*KKKGGXXPPPP 562
PPPP F PP GG PPPP
Sbjct: 319 PPPPSRFGPPG---MGGMPPPPP 338
Score = 28.7 bits (61), Expect = 7.7
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 925 PPPXXXXFFFXKKKXKXXPPPXXXFXXXXXXPPPPPP 1035
PPP F PPP PPPPPP
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +2
Query: 494 PPPPXVFXPPX*KKKGGXXPPPP 562
PPPP F PP GG PPPP
Sbjct: 329 PPPPSRFGPPG---MGGMPPPPP 348
Score = 28.7 bits (61), Expect = 7.7
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 925 PPPXXXXFFFXKKKXKXXPPPXXXFXXXXXXPPPPPP 1035
PPP F PPP PPPPPP
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 925 PPPXXXXFFFXKKKXKXXPPPXXXFXXXXXXPPPPPPP 1038
PPP PPP PPPPPPP
Sbjct: 218 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 255
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 925 PPPXXXXFFFXKKKXKXXPPPXXXFXXXXXXPPPPPPP 1038
PPP PPP PPPPPPP
Sbjct: 204 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 241
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 925 PPPXXXXFFFXKKKXKXXPPPXXXFXXXXXXPPPPPPP 1038
PPP PPP PPPPPPP
Sbjct: 204 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 241
>U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 8 protein.
Length = 373
Score = 29.5 bits (63), Expect = 4.4
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -3
Query: 561 GGGGXXPPFFF*XGGKKTXGGGGXXKXFFXPXP 463
G GG P FF GG GGGG FF P P
Sbjct: 197 GPGGFSPLSFFLNGGLGGTGGGGN-NGFFVPVP 228
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical protein
C31C9.6 protein.
Length = 965
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 964 KXKXXPPPXXXFXXXXXXPPPPPPP 1038
K PPP PPPPPPP
Sbjct: 487 KSPPPPPPLPPIATPSSVPPPPPPP 511
Score = 28.7 bits (61), Expect = 7.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 963 KKXXXPPPXXXXFXXXXXPPPPPPP 1037
K PPP PPPPPPP
Sbjct: 487 KSPPPPPPLPPIATPSSVPPPPPPP 511
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 5.8
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +1
Query: 868 GGXXKKKKXPPXXXXXXXXPPPXXXXFFFXKKKXKXXPPPXXXFXXXXXXPPPPPPP 1038
GG PP PPP PPP PPPPPPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITG---GPPPPPPPGGLPPISGGPPPPPPP 764
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 5.8
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +1
Query: 868 GGXXKKKKXPPXXXXXXXXPPPXXXXFFFXKKKXKXXPPPXXXFXXXXXXPPPPPPP 1038
GG PP PPP PPP PPPPPPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITG---GPPPPPPPGGLPPISGGPPPPPPP 764
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical protein
B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 964 KXKXXPPPXXXFXXXXXXPPPPPPP 1038
K PPP PPPPPPP
Sbjct: 494 KSPPPPPPLPPIATPSSVPPPPPPP 518
Score = 28.7 bits (61), Expect = 7.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 963 KKXXXPPPXXXXFXXXXXPPPPPPP 1037
K PPP PPPPPPP
Sbjct: 494 KSPPPPPPLPPIATPSSVPPPPPPP 518
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 5.8
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +1
Query: 868 GGXXKKKKXPPXXXXXXXXPPPXXXXFFFXKKKXKXXPPPXXXFXXXXXXPPPPPPP 1038
GG PP PPP PPP PPPPPPP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITG---GPPPPPPPGGLPPISGGPPPPPPP 347
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical protein
C33B4.3b protein.
Length = 993
Score = 28.7 bits (61), Expect = 7.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 978 PPPXXXXFXXXXXPPPPPPP 1037
PPP PPPPPPP
Sbjct: 796 PPPPLPPISSGAPPPPPPPP 815
Score = 28.7 bits (61), Expect = 7.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 979 PPPXXXFXXXXXXPPPPPPP 1038
PPP PPPPPPP
Sbjct: 797 PPPLPPISSGAPPPPPPPPP 816
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical protein
C33B4.3a protein.
Length = 1110
Score = 28.7 bits (61), Expect = 7.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 978 PPPXXXXFXXXXXPPPPPPP 1037
PPP PPPPPPP
Sbjct: 796 PPPPLPPISSGAPPPPPPPP 815
Score = 28.7 bits (61), Expect = 7.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 979 PPPXXXFXXXXXXPPPPPPP 1038
PPP PPPPPPP
Sbjct: 797 PPPLPPISSGAPPPPPPPPP 816
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.7 bits (61), Expect = 7.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 979 PPPXXXFXXXXXXPPPPPPP 1038
PPP PPPPPPP
Sbjct: 71 PPPPPLISILQQAPPPPPPP 90
Score = 28.7 bits (61), Expect = 7.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 978 PPPXXXXFXXXXXPPPPPPP 1037
PPP PPPPPPP
Sbjct: 72 PPPPLISILQQAPPPPPPPP 91
Score = 28.7 bits (61), Expect = 7.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 978 PPPXXXXFXXXXXPPPPPPP 1037
PPP PPPPPPP
Sbjct: 73 PPPLISILQQAPPPPPPPPP 92
Score = 28.7 bits (61), Expect = 7.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 979 PPPXXXFXXXXXXPPPPPPP 1038
PPP PPPPPPP
Sbjct: 73 PPPLISILQQAPPPPPPPPP 92
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 7.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 978 PPPXXXXFXXXXXPPPPPPP 1037
PPP PPPPPPP
Sbjct: 565 PPPLPQNLSGAPPPPPPPPP 584
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,339,954
Number of Sequences: 27780
Number of extensions: 430782
Number of successful extensions: 6193
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2727
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2950351116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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