Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_E09
         (861 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    41   2e-05
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    41   2e-05
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    23   2.7  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   4.8  

>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 40.7 bits (91), Expect = 2e-05
 Identities = 22/61 (36%), Positives = 31/61 (50%)
 Frame = +3

Query: 129 CSENEIYVKCVQEQRGPMTCSEKDLLMPYPLVRQEYCKAGCVCKEGYLKDDSGKCVAREN 308
           C  NEI+ +C  + R    C     ++P PL  +  C  GCVC+ GYL++    CV R  
Sbjct: 37  CPSNEIFSRC--DGRCQRFCPN---VVPKPLCIK-ICAPGCVCRLGYLRNKKKVCVPRSK 90

Query: 309 C 311
           C
Sbjct: 91  C 91



 Score = 36.3 bits (80), Expect = 4e-04
 Identities = 21/61 (34%), Positives = 29/61 (47%)
 Frame = +3

Query: 327 CSENEIYVKCVQAQCGPMTCSEKDLPMPCPLVRREYCKARCVCKQGYLKDDSGKCVAREN 506
           C  NEI+ +C   +C    C      +P PL  +  C   CVC+ GYL++    CV R  
Sbjct: 37  CPSNEIFSRC-DGRCQRF-CPNV---VPKPLCIK-ICAPGCVCRLGYLRNKKKVCVPRSK 90

Query: 507 C 509
           C
Sbjct: 91  C 91


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 40.7 bits (91), Expect = 2e-05
 Identities = 22/61 (36%), Positives = 31/61 (50%)
 Frame = +3

Query: 129 CSENEIYVKCVQEQRGPMTCSEKDLLMPYPLVRQEYCKAGCVCKEGYLKDDSGKCVAREN 308
           C  NEI+ +C  + R    C     ++P PL  +  C  GCVC+ GYL++    CV R  
Sbjct: 37  CPSNEIFSRC--DGRCQRFCPN---VVPKPLCIK-ICAPGCVCRLGYLRNKKKVCVPRSK 90

Query: 309 C 311
           C
Sbjct: 91  C 91



 Score = 36.3 bits (80), Expect = 4e-04
 Identities = 21/61 (34%), Positives = 29/61 (47%)
 Frame = +3

Query: 327 CSENEIYVKCVQAQCGPMTCSEKDLPMPCPLVRREYCKARCVCKQGYLKDDSGKCVAREN 506
           C  NEI+ +C   +C    C      +P PL  +  C   CVC+ GYL++    CV R  
Sbjct: 37  CPSNEIFSRC-DGRCQRF-CPNV---VPKPLCIK-ICAPGCVCRLGYLRNKKKVCVPRSK 90

Query: 507 C 509
           C
Sbjct: 91  C 91


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 522 CSGENEEFSNCTNPCPP 572
           CS E  E S  +NPC P
Sbjct: 93  CSAEKFECSKTSNPCLP 109


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
 Frame = -1

Query: 429 LASPMGRA*VSPSLSTSLGRTVL-GHISRIFHFQSRGQNLGSFLGRHIYRYRLSDIPLYI 253
           LAS       + + +TS G  +L G +S+  H Q  G  + +  GRH+  +     P Y 
Sbjct: 169 LASVKAEPGSTGTTTTSTGTRLLHGILSQ--HPQQHGLGVQNGYGRHLPGHAQMGRPSYT 226

Query: 252 RIRLCSTLASPMGRA*VSPS 193
              + +T     G    SP+
Sbjct: 227 TATMATTSTPGSGSLPASPA 246


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,303
Number of Sequences: 438
Number of extensions: 5166
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)