Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_E05
         (894 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1008 - 7987936-7988628,7988923-7989102                           33   0.40 
07_01_1201 - 11419851-11419913,11420090-11420311                       32   0.54 
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.6  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.7  
10_08_0223 - 15986763-15987575                                         28   8.7  
05_04_0142 - 18372751-18373338                                         28   8.7  

>01_01_1008 - 7987936-7988628,7988923-7989102
          Length = 290

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -2

Query: 689 RREKGGQVSGKRQGRNRRAXEGAXQGETXG 600
           RR  GG+V+G+   R+RR   GA +GE  G
Sbjct: 245 RRGGGGEVNGEEAARSRRRRRGAWEGEEEG 274


>07_01_1201 - 11419851-11419913,11420090-11420311
          Length = 94

 Score = 32.3 bits (70), Expect = 0.54
 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = +2

Query: 524 LRPPDEHHKNRRSSQRWRN--PTGL*RYXAFPPGKLPXALSCSDPAAYRIP 670
           L PP          Q+WR+  PTG   + +FP G LP A     PA  R P
Sbjct: 13  LLPPPPPLPALPQGQQWRSTGPTGKLCFCSFPAGALPPAAGAGQPAPDRQP 63


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +3

Query: 336 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 491
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 285 NESAN---ARGEAVCVLGALPLPRSLTRCAR 368
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>10_08_0223 - 15986763-15987575
          Length = 270

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
 Frame = -2

Query: 677 GGQVSGKRQGRNRRAXEGAXQGETXGIFIVLSGFATSDLSVDFCDARQGGGA----YGKT 510
           GG   G   G      +GA +  +  I +  S  +  D +  + DA  GGG     +G  
Sbjct: 146 GGSNGGSGYGAGAGVGQGAGESGS-SIAMAPSPSSGGDYNGGYADAAGGGGGGGGGHGGG 204

Query: 509 PATRPFYGSWPFAG 468
           PA  P YG    AG
Sbjct: 205 PAASPSYGVGAGAG 218


>05_04_0142 - 18372751-18373338
          Length = 195

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 722 SGEX*EGATVSRREKGGQVSGKRQGRNRRA 633
           +G    G  V   E+GG   G++QGR R+A
Sbjct: 52  AGSSSSGRRVEEEEQGGGGGGRKQGRRRKA 81


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,942,160
Number of Sequences: 37544
Number of extensions: 388707
Number of successful extensions: 1083
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)