Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_D23
         (888 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    25   0.70 
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         25   0.70 
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    25   0.70 
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    25   0.70 
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    25   0.70 
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         25   0.92 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   2.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.8  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   6.5  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   8.6  

>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 25.4 bits (53), Expect = 0.70
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = +1

Query: 295 YNREIFNDDRGKLTGQAYGTRVLGPGGDSTNYGG---RLDWANKNAQATIDLNRQIGGR 462
           Y + ++  D+  +TG AYG   + PG  S  + G     ++ N   +   ++ R  GGR
Sbjct: 60  YKQRVY--DKNGMTGDAYGGLNIRPGQPSRQHAGFEFGKEYKNGFIKGQSEVQRGPGGR 116


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 25.4 bits (53), Expect = 0.70
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = -2

Query: 137 FCVNTHQSCSEDIKQICIHFELYQVSLLKTESNLK 33
           + VNT Q  + D +Q  IH+E  Q ++L T+S+ K
Sbjct: 276 YYVNTEQFRTSDYQQNDIHYEGVQ-NILDTQSSAK 309


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 25.4 bits (53), Expect = 0.70
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 854 PPXXXPPPPPP 886
           PP   PPPPPP
Sbjct: 338 PPKPAPPPPPP 348



 Score = 25.4 bits (53), Expect = 0.70
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 856 PXXPXPPPPPP 888
           P  P PPPPPP
Sbjct: 338 PPKPAPPPPPP 348



 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +3

Query: 852 PPPXXXPPPPP 884
           PP    PPPPP
Sbjct: 338 PPKPAPPPPPP 348


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 25.4 bits (53), Expect = 0.70
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = -2

Query: 137 FCVNTHQSCSEDIKQICIHFELYQVSLLKTESNLK 33
           + VNT Q  + D +Q  IH+E  Q ++L T+S+ K
Sbjct: 276 YYVNTEQFRTSDYQQNDIHYEGVQ-NILDTQSSAK 309


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 25.4 bits (53), Expect = 0.70
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = -2

Query: 137 FCVNTHQSCSEDIKQICIHFELYQVSLLKTESNLK 33
           + VNT Q  + D +Q  IH+E  Q ++L T+S+ K
Sbjct: 276 YYVNTEQFRTSDYQQNDIHYEGVQ-NILDTQSSAK 309


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -1

Query: 744 DSREPNGRVRHRWVNCDV 691
           DS EP   +RHR V CDV
Sbjct: 49  DSNEPLLPLRHRRVTCDV 66


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 865  PXPPPPPP 888
            P PPPPPP
Sbjct: 1355 PPPPPPPP 1362


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 865  PXPPPPPP 888
            P PPPPPP
Sbjct: 1857 PEPPPPPP 1864


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 887 GGGGGGXGXXGG 852
           GGGGGG G   G
Sbjct: 46  GGGGGGLGIASG 57


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +3

Query: 99  YIFATTLVCVNAEVYGPSDYAEDYSISGQSSRPT 200
           ++FA T  C+N  VYG  +  +    +  S+RPT
Sbjct: 302 FLFACTNSCMNPIVYGAFNIRDR---NKTSARPT 332


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,905
Number of Sequences: 438
Number of extensions: 6326
Number of successful extensions: 30
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)