Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_D21
         (887 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ556830-1|CAD89243.1|   88|Homo sapiens immunoglobulin heavy ch...    31   7.4  
BC114928-1|AAI14929.1|  562|Homo sapiens TMPRSS13 protein protein.     30   9.8  
AY190317-1|AAO38062.1|  558|Homo sapiens transmembrane protease ...    30   9.8  
AK027798-1|BAB55376.1|  491|Homo sapiens protein ( Homo sapiens ...    30   9.8  
AB048796-1|BAB39741.2|  581|Homo sapiens membrane-type mosaic se...    30   9.8  

>AJ556830-1|CAD89243.1|   88|Homo sapiens immunoglobulin heavy chain
           protein.
          Length = 88

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +2

Query: 524 LFWLGYLYTASSMH*R--IPTHGDICLKTSINSSRLTMMFLTQT**YSHYWRKLASSMW 694
           L W+GY+Y + + H    + +  DI L TS N   LT+  +T      +Y   L  + W
Sbjct: 25  LEWIGYIYYSGTTHYNPSLKSRVDISLDTSKNQFSLTLSSVTAADTAVYYCANLPRASW 83


>BC114928-1|AAI14929.1|  562|Homo sapiens TMPRSS13 protein protein.
          Length = 562

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +1

Query: 184 LPKFKWKEGKKRIFDIGC 237
           LPKF W+EG+K++  IGC
Sbjct: 149 LPKFTWREGQKQLPLIGC 166


>AY190317-1|AAO38062.1|  558|Homo sapiens transmembrane protease
           serine 6 protein.
          Length = 558

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +1

Query: 184 LPKFKWKEGKKRIFDIGC 237
           LPKF W+EG+K++  IGC
Sbjct: 149 LPKFTWREGQKQLPLIGC 166


>AK027798-1|BAB55376.1|  491|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14892 fis, clone PLACE1004270, weakly similar to
           TRANSMEMBRANE PROTEASE, SERINE 2 (EC 3.4.21.-). ).
          Length = 491

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +1

Query: 184 LPKFKWKEGKKRIFDIGC 237
           LPKF W+EG+K++  IGC
Sbjct: 154 LPKFTWREGQKQLPLIGC 171


>AB048796-1|BAB39741.2|  581|Homo sapiens membrane-type mosaic
           serine protease protein.
          Length = 581

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +1

Query: 184 LPKFKWKEGKKRIFDIGC 237
           LPKF W+EG+K++  IGC
Sbjct: 149 LPKFTWREGQKQLPLIGC 166


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,102,400
Number of Sequences: 237096
Number of extensions: 2276783
Number of successful extensions: 8279
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8279
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)