Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_D20
         (852 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00031-7|AAK18870.2|  422|Caenorhabditis elegans Hypothetical pr...    30   2.4  
Z79757-6|CAB02127.1|  350|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AL110485-22|CAB60371.1|  399|Caenorhabditis elegans Hypothetical...    29   3.2  
AC024882-13|AAF60926.1|  342|Caenorhabditis elegans Seven tm rec...    28   7.3  
Z27079-8|CAA81595.2|  798|Caenorhabditis elegans Hypothetical pr...    28   9.7  
AF026204-5|AAB71249.1|  239|Caenorhabditis elegans Hypothetical ...    28   9.7  

>U00031-7|AAK18870.2|  422|Caenorhabditis elegans Hypothetical
           protein B0361.7 protein.
          Length = 422

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
 Frame = +2

Query: 200 LEQVLIFSRHNLRVPLSKHI-DEYTNKIFPKWSKEPGMLTEKGALLEGHMSEYLTKWMRE 376
           LE V    RH  R P      D+ T     KW +  G LTE+GA  +  + ++L +  R 
Sbjct: 31  LEYVHTVWRHGDRTPAELLFPDDIT-----KWPEGLGELTEQGAAQQYRLGQWLKR--RY 83

Query: 377 NQLLPGTCPDKETVLIYANNKRRTIATAKAFVDAAFP 487
              L G   ++  + I +++  RT+ +A+A +   FP
Sbjct: 84  GSWL-GEKFNRNAIYIRSSDYNRTLMSAQANMAGLFP 119


>Z79757-6|CAB02127.1|  350|Caenorhabditis elegans Hypothetical
           protein F55B12.6 protein.
          Length = 350

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +1

Query: 340 SYERISNEMDERESTFTRNVSRQ 408
           SY RI+N  +E ES FT+N+ +Q
Sbjct: 241 SYRRIANLQNEGESEFTKNLQKQ 263


>AL110485-22|CAB60371.1|  399|Caenorhabditis elegans Hypothetical
           protein Y46G5A.28 protein.
          Length = 399

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 26/102 (25%), Positives = 48/102 (47%)
 Frame = +2

Query: 299 EPGMLTEKGALLEGHMSEYLTKWMRENQLLPGTCPDKETVLIYANNKRRTIATAKAFVDA 478
           E G+ T++   LE H  E + K  R++Q++   C       I + N    I+ A  F  A
Sbjct: 205 ESGIYTDEELELEDHF-EAVRKEDRKDQVMTEICMMLLAGYIRSGNSE-VISAAIKFTWA 262

Query: 479 AFPDCNINVKHKKDFDIHDIIFNSAIHNTTEAYKQKVLEEIE 604
              D ++ +  K  +DI ++I+N  +HN         ++E++
Sbjct: 263 F--DYSLEMYQK--YDIQNLIYNFGVHNDDAELLMNHIKELQ 300


>AC024882-13|AAF60926.1|  342|Caenorhabditis elegans Seven tm
           receptor protein 164 protein.
          Length = 342

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = +1

Query: 340 SYERISNEMDERESTFTRNVSRQ 408
           SY+RI++ +DE +S FTRN+  Q
Sbjct: 226 SYKRITSLIDEGQSEFTRNLQIQ 248


>Z27079-8|CAA81595.2|  798|Caenorhabditis elegans Hypothetical
           protein T05G5.8 protein.
          Length = 798

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +2

Query: 326 ALLEGHMSEYLTKWMRENQLLPGTCPDKETVLIYANNK 439
           A LEG++ E   KW  E QL        E V+IYA+N+
Sbjct: 230 AALEGNVKENFVKWFIEQQL-------SEYVIIYADNE 260


>AF026204-5|AAB71249.1|  239|Caenorhabditis elegans Hypothetical
           protein C30E1.4 protein.
          Length = 239

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
 Frame = +2

Query: 440 RRTIATAKAFVDAAFPDCNINVKHKKDFDIHDIIFNSAIHNTTEAYKQKV----LEEIEE 607
           R +IA+  A ++  F   N+N  H K   IH+I+ +  IH +  +Y Q V    +E +E 
Sbjct: 74  RVSIASDSASLNNPF---NVNFYHAKT--IHNIVLHQPIHLSVASYSQSVFSLKVESVEN 128

Query: 608 ML 613
            L
Sbjct: 129 FL 130


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,741,155
Number of Sequences: 27780
Number of extensions: 340806
Number of successful extensions: 918
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)