Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_D16
(871 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13D6.02c |byr3||zinc finger protein Byr3|Schizosaccharomyces... 121 2e-28
SPAC683.02c ||SPAC694.01c|zf-CCHC type zinc finger protein|Schiz... 58 2e-09
SPBP35G2.08c |air1||zinc knuckle TRAMP complex subunit Air1|Schi... 50 6e-07
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 44 3e-05
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 35 0.017
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 35 0.017
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 30 0.37
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 30 0.49
SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFII... 29 0.86
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 29 0.86
SPAC23H4.10c |thi4||thiamine-phosphate dipyrophosphorylase/hydro... 28 1.5
SPBC31F10.10c |||zf-MYND type zinc finger protein|Schizosaccharo... 27 2.6
SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family |Schizos... 27 4.6
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 27 4.6
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 26 6.1
>SPAC13D6.02c |byr3||zinc finger protein Byr3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 179
Score = 121 bits (291), Expect = 2e-28
Identities = 59/151 (39%), Positives = 78/151 (51%), Gaps = 13/151 (8%)
Frame = +2
Query: 197 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKE--EADRCYRCNG 370
CY C GH ARECT+G + C+ CN+TGH A +C E + CY C
Sbjct: 19 CYNCGENGHQARECTKGSI-------------CYNCNQTGHKASECTEPQQEKTCYACGT 65
Query: 371 TGHIARECAQSPDE---PSCYNCNKTGHIARNCPEGGRES--------ATQTCYNCNKSG 517
GH+ R+C SP+ CY C + GHIAR+C G++S + CY C G
Sbjct: 66 AGHLVRDCPSSPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYG 125
Query: 518 HISRNCPDGTKTCYVCGKPGHISRECDEGAE 610
H +R+C G K CY CGK GH S EC + ++
Sbjct: 126 HQARDCTMGVK-CYSCGKIGHRSFECQQASD 155
Score = 101 bits (243), Expect = 1e-22
Identities = 54/153 (35%), Positives = 73/153 (47%), Gaps = 18/153 (11%)
Frame = +2
Query: 191 SVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC-----KEEADRC 355
S+CY CN+TGH A ECT+ +Q + C+ C GH RDC + C
Sbjct: 36 SICYNCNQTGHKASECTE----------PQQEKTCYACGTAGHLVRDCPSSPNPRQGAEC 85
Query: 356 YRCNGTGHIARECAQSPDEP-----------SCYNCNKTGHIARNCPEGGRESATQTCYN 502
Y+C GHIAR+C + + +CY C GH AR+C G + CY+
Sbjct: 86 YKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTMGVK------CYS 139
Query: 503 CNKSGHISRNCPDGT--KTCYVCGKPGHISREC 595
C K GH S C + + CY C +PGHI+ C
Sbjct: 140 CGKIGHRSFECQQASDGQLCYKCNQPGHIAVNC 172
Score = 101 bits (241), Expect = 2e-22
Identities = 45/124 (36%), Positives = 62/124 (50%), Gaps = 13/124 (10%)
Frame = +2
Query: 278 RQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARN 457
R +C+ C GH AR+C + CY CN TGH A EC + E +CY C GH+ R+
Sbjct: 14 RPGPRCYNCGENGHQARECTK-GSICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRD 72
Query: 458 CPEGGRESATQTCYNCNKSGHISRNC-PDGTKT------------CYVCGKPGHISRECD 598
CP CY C + GHI+R+C +G ++ CY CG GH +R+C
Sbjct: 73 CPSSPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCT 132
Query: 599 EGAE 610
G +
Sbjct: 133 MGVK 136
Score = 93.5 bits (222), Expect = 4e-20
Identities = 43/99 (43%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Frame = +2
Query: 167 SKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDS-GFNRQREKCFKCNRTGHFARDCKEE 343
S P + CYKC R GH AR+C G S G +R C+ C GH ARDC
Sbjct: 75 SSPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTMG 134
Query: 344 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 460
+CY C GH + EC Q+ D CY CN+ GHIA NC
Sbjct: 135 V-KCYSCGKIGHRSFECQQASDGQLCYKCNQPGHIAVNC 172
Score = 89.4 bits (212), Expect = 6e-19
Identities = 42/105 (40%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Frame = +2
Query: 350 RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISR 529
RCY C GH AREC + CYNCN+TGH A C E +E +TCY C +GH+ R
Sbjct: 18 RCYNCGENGHQARECTKGS---ICYNCNQTGHKASECTEPQQE---KTCYACGTAGHLVR 71
Query: 530 NCPDGTKT-----CYVCGKPGHISRECDEGAELAAATLSPLQSTM 649
+CP CY CG+ GHI+R+C + + +S M
Sbjct: 72 DCPSSPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNM 116
Score = 31.9 bits (69), Expect = 0.12
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 179 AMSSSVCYKCNRTGHFARECT 241
A +CYKCN+ GH A CT
Sbjct: 153 ASDGQLCYKCNQPGHIAVNCT 173
>SPAC683.02c ||SPAC694.01c|zf-CCHC type zinc finger
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 218
Score = 58.0 bits (134), Expect = 2e-09
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 12/131 (9%)
Frame = +2
Query: 278 RQREK-CFKCNRTGHFARDCKEEADR---CYRCNGTGHIARECA-QSPDE-PSCYNCNKT 439
R R+K CF C + GH +DC E D C+RC H C+ + P + C+ C++
Sbjct: 73 RNRDKFCFACRQQGHIVQDCPEAKDNVSICFRCGSKEHSLNACSKKGPLKFAKCFICHEN 132
Query: 440 GHIARNCPEG--GRESATQTCYNCNKSGHISRNC----PDGTKTCYVCGKPGHISRECDE 601
GH++ C + G C C+ H++++C D +V G G + D
Sbjct: 133 GHLSGQCEQNPKGLYPKGGCCKFCSSVHHLAKDCDQVNKDDVSFGHVVGVAGTTGADEDV 192
Query: 602 GAELAAATLSP 634
E A +P
Sbjct: 193 YHEYAKTVAAP 203
Score = 48.4 bits (110), Expect = 1e-06
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +2
Query: 386 RECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC----PDGTKT 553
R Q + C+ C + GHI ++CPE + C+ C H C P
Sbjct: 68 RRINQRNRDKFCFACRQQGHIVQDCPEA--KDNVSICFRCGSKEHSLNACSKKGPLKFAK 125
Query: 554 CYVCGKPGHISRECDE 601
C++C + GH+S +C++
Sbjct: 126 CFICHENGHLSGQCEQ 141
Score = 47.2 bits (107), Expect = 3e-06
Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Frame = +2
Query: 197 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD----RCYRC 364
C+ C + GH ++C + ++D+ CF+C H C ++ +C+ C
Sbjct: 79 CFACRQQGHIVQDCPE----AKDN-----VSICFRCGSKEHSLNACSKKGPLKFAKCFIC 129
Query: 365 NGTGHIARECAQSPD--EPS---CYNCNKTGHIARNCPEGGRESAT 487
+ GH++ +C Q+P P C C+ H+A++C + ++ +
Sbjct: 130 HENGHLSGQCEQNPKGLYPKGGCCKFCSSVHHLAKDCDQVNKDDVS 175
Score = 37.9 bits (84), Expect = 0.002
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Frame = +2
Query: 191 SVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKE-------EAD 349
S+C++C H C++ G + + KCF C+ GH + C++ +
Sbjct: 100 SICFRCGSKEHSLNACSKKGPL--------KFAKCFICHENGHLSGQCEQNPKGLYPKGG 151
Query: 350 RCYRCNGTGHIARECAQ 400
C C+ H+A++C Q
Sbjct: 152 CCKFCSSVHHLAKDCDQ 168
Score = 30.3 bits (65), Expect = 0.37
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +2
Query: 167 SKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKE 340
SK + + C+ C+ GH + +C Q G + C C+ H A+DC +
Sbjct: 116 SKKGPLKFAKCFICHENGHLSGQCEQ-----NPKGLYPKGGCCKFCSSVHHLAKDCDQ 168
>SPBP35G2.08c |air1||zinc knuckle TRAMP complex subunit
Air1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 313
Score = 49.6 bits (113), Expect = 6e-07
Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Frame = +2
Query: 305 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNK-TGHIARNCPEGGRES 481
+R +F D E+ C+ C G GHI+++C C C HI+ CP
Sbjct: 74 SRGRYFGSD-PSESIVCHNCKGNGHISKDC----PHVLCTTCGAIDDHISVRCP------ 122
Query: 482 ATQTCYNCNKSGHISRNCPD----GTKTCYVCGKPGHISREC 595
T+ C NC GHI+ C + G + C C H S C
Sbjct: 123 WTKKCMNCGLLGHIAARCSEPRKRGPRVCRTCHTDTHTSSTC 164
Score = 48.8 bits (111), Expect = 1e-06
Identities = 25/62 (40%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 419 CYNCNKTGHIARNCPEGGRESATQTCYNCNK-SGHISRNCPDGTKTCYVCGKPGHISREC 595
C+NC GHI+++CP C C HIS CP TK C CG GHI+ C
Sbjct: 89 CHNCKGNGHISKDCPH-------VLCTTCGAIDDHISVRCP-WTKKCMNCGLLGHIAARC 140
Query: 596 DE 601
E
Sbjct: 141 SE 142
Score = 41.1 bits (92), Expect = 2e-04
Identities = 32/130 (24%), Positives = 47/130 (36%), Gaps = 6/130 (4%)
Frame = +2
Query: 188 SSVCYKCNRTGHFAREC------TQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD 349
S VC+ C GH +++C T G + S +KC C GH A C E
Sbjct: 86 SIVCHNCKGNGHISKDCPHVLCTTCGAIDDHISVRCPWTKKCMNCGLLGHIAARCSEPRK 145
Query: 350 RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISR 529
R R T H + + Y K + + E + CYNC H
Sbjct: 146 RGPRVCRTCHTDTHTSSTCPLIWRYYVEKEHPVRIDVSE-----VRKFCYNCASDEHFGD 200
Query: 530 NCPDGTKTCY 559
+C +++ Y
Sbjct: 201 DCTLPSRSNY 210
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 44.0 bits (99), Expect = 3e-05
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 419 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCP 538
C NC GH +CPE + C +C GHI+R+CP
Sbjct: 311 CQNCGNVGHRRFDCPERINHTMNIVCRHCGSIGHIARDCP 350
Score = 39.1 bits (87), Expect = 8e-04
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Frame = +2
Query: 473 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISREC 595
R+ Q C NC GH +CP+ C CG GHI+R+C
Sbjct: 304 RDDENQVCQNCGNVGHRRFDCPERINHTMNIVCRHCGSIGHIARDC 349
Score = 36.7 bits (81), Expect = 0.004
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
Frame = +2
Query: 281 QREKCFKCNRTGHFARDCKEEADR-----CYRCNGTGHIARECAQSPDEP 415
+ + C C GH DC E + C C GHIAR+C +P
Sbjct: 307 ENQVCQNCGNVGHRRFDCPERINHTMNIVCRHCGSIGHIARDCPVRDQQP 356
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +2
Query: 188 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC 334
+ VC C GH +C + R + + C C GH ARDC
Sbjct: 308 NQVCQNCGNVGHRRFDCPE-----RIN--HTMNIVCRHCGSIGHIARDC 349
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 34.7 bits (76), Expect = 0.017
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 518 HISRNCPDGTKTCYVCGKPGHISREC 595
H + CP TCY CGK H REC
Sbjct: 1794 HTGKACPVRLSTCYKCGKADHNLREC 1819
Score = 27.5 bits (58), Expect = 2.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 191 SVCYKCNRTGHFAREC 238
S CYKC + H REC
Sbjct: 1804 STCYKCGKADHNLREC 1819
Score = 27.1 bits (57), Expect = 3.5
Identities = 9/26 (34%), Positives = 11/26 (42%)
Frame = +2
Query: 317 HFARDCKEEADRCYRCNGTGHIAREC 394
H + C CY+C H REC
Sbjct: 1794 HTGKACPVRLSTCYKCGKADHNLREC 1819
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 34.7 bits (76), Expect = 0.017
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 518 HISRNCPDGTKTCYVCGKPGHISREC 595
H + CP TCY CGK H REC
Sbjct: 1794 HTGKACPVRLSTCYKCGKADHNLREC 1819
Score = 27.5 bits (58), Expect = 2.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 191 SVCYKCNRTGHFAREC 238
S CYKC + H REC
Sbjct: 1804 STCYKCGKADHNLREC 1819
Score = 27.1 bits (57), Expect = 3.5
Identities = 9/26 (34%), Positives = 11/26 (42%)
Frame = +2
Query: 317 HFARDCKEEADRCYRCNGTGHIAREC 394
H + C CY+C H REC
Sbjct: 1794 HTGKACPVRLSTCYKCGKADHNLREC 1819
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 30.3 bits (65), Expect = 0.37
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Frame = +2
Query: 455 NCPEGGRESATQTCYN----CNKSGHISRNCPDGTKTCYVC 565
+CP+G E T C+N C +G+IS P VC
Sbjct: 66 DCPDGSDEPGTSACHNGKFFCKNTGYISSYIPSNRVDDTVC 106
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 29.9 bits (64), Expect = 0.49
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +2
Query: 398 QSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCN-KSGHISRNCPDGTKTCYVCG 568
++ ++P+ N + N + T TC NC ++ + R PDG C CG
Sbjct: 603 KNAEKPTVSNAAEDKKGDANTRRANATNPTPTCTNCQTRTTPLWRRSPDGQPLCNACG 660
>SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFIID
complex subunit Taf111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 979
Score = 29.1 bits (62), Expect = 0.86
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 470 GRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKP 574
GR+ T+ C NC + GH+ N K C + G+P
Sbjct: 939 GRKPTTRKCSNCGQVGHMKTN-----KICPLFGRP 968
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = +2
Query: 398 QSPDEPSCYNCNKTGHIARN--CPEGGR 475
+ P C NC + GH+ N CP GR
Sbjct: 940 RKPTTRKCSNCGQVGHMKTNKICPLFGR 967
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 29.1 bits (62), Expect = 0.86
Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 1/108 (0%)
Frame = +2
Query: 173 PIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFAR-DCKEEAD 349
P A +V K N GH E G V +S + K + +R G F+R +
Sbjct: 384 PKAAPKAVSQKTNVDGHRNHEAKHGNTVQNESKSQKSSNKEGRSSRGGFFSRLSFSRSSS 443
Query: 350 RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQT 493
R + + H +PD P+ + ++ G+++ T+T
Sbjct: 444 RMKKGSKAKH-----EDAPDVPAIPHAYIADSSTKSSYRNGKKTPTRT 486
>SPAC23H4.10c |thi4||thiamine-phosphate
dipyrophosphorylase/hydroxyethylthiazole kinase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 518
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 571 ARPH-LARVRRGRGTSRSHLVSLTINYVYYDATHG 672
ARP L V G T+RS +++ +NY YYD G
Sbjct: 322 ARPVILDPVAVGATTARSKVINTLLNYAYYDIIKG 356
>SPBC31F10.10c |||zf-MYND type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 574
Score = 27.5 bits (58), Expect = 2.6
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +2
Query: 275 NRQREKCFKCNRTGHFARDCKEEA 346
+RQ KC +C RT + +++C+ +A
Sbjct: 492 SRQFAKCRRCRRTKYCSKECQHQA 515
>SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 482
Score = 26.6 bits (56), Expect = 4.6
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 293 CFKCNRTGHFARDCKEEADRCY----RCNGTGHIARECAQSPDEPS 418
C++C + GH+ + C AD Y R T I R ++ + P+
Sbjct: 185 CYRCGQKGHWIQACPTNADPNYDGKPRVKRTTGIPRSFLKNVERPA 230
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 5/31 (16%)
Frame = +2
Query: 386 RECAQSPDEPS-----CYNCNKTGHIARNCP 463
R A PD+P CY C + GH + CP
Sbjct: 169 RIAASVPDKPPPPGYICYRCGQKGHWIQACP 199
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 494 CYNCNKSGHISRNCPDGTKTCYVCGKP 574
CY C + GH + CP Y GKP
Sbjct: 185 CYRCGQKGHWIQACPTNADPNY-DGKP 210
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 26.6 bits (56), Expect = 4.6
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = -3
Query: 503 SYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRALCA-----PCRYICSNGQPL 339
S S ++S TP P SS+ P+ S TTA+ ++ LC Y C N Q
Sbjct: 843 SSSTTSSITPTPTTTSSITPTPTTTSTTTTAQSTGMQ---LCGSNYYDASSYYCDNDQLC 899
Query: 338 P 336
P
Sbjct: 900 P 900
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 26.2 bits (55), Expect = 6.1
Identities = 25/107 (23%), Positives = 40/107 (37%), Gaps = 1/107 (0%)
Frame = +2
Query: 452 RNCPE-GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRECDEGAELAAATL 628
R+ P+ GG A + C+N G I G TC G C+ A+L A++
Sbjct: 363 RDAPKPGGLRRANKPCFNKETKGSIFSKENKGPFTCNPWGAKKVSPPPCEVLADLNTASI 422
Query: 629 SPLQSTMYIMMPRTDDKQRTPRATHDNRLQYRCXAASAPQTEX*RSN 769
+ R ++ + T ++ C AS+ T R N
Sbjct: 423 -------FYKFKRLEEMEMTRSLAFNDSKSDWCCLASSRSTSISRKN 462
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,983,240
Number of Sequences: 5004
Number of extensions: 55286
Number of successful extensions: 234
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 434475230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -