Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_D08
         (875 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC005368-1|AAH05368.1|  505|Homo sapiens zinc finger protein 649...    31   5.5  
AK022706-1|BAB14191.1|  505|Homo sapiens protein ( Homo sapiens ...    31   5.5  
AF052384-1|AAC78786.1|  146|Homo sapiens IgM heavy chain variabl...    30   9.6  

>BC005368-1|AAH05368.1|  505|Homo sapiens zinc finger protein 649
           protein.
          Length = 505

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +1

Query: 16  PISLLWEFLKILSCYNNRRT*HITHCGKRFKKKQQQNE 129
           PIS   +FLK    +N  +    T CGK F KK Q  E
Sbjct: 158 PISTKSQFLKHQQTHNIEKAHECTDCGKAFLKKSQLTE 195


>AK022706-1|BAB14191.1|  505|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12644 fis, clone NT2RM4001979, weakly similar to
           ZINC FINGER PROTEIN 84. ).
          Length = 505

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +1

Query: 16  PISLLWEFLKILSCYNNRRT*HITHCGKRFKKKQQQNE 129
           PIS   +FLK    +N  +    T CGK F KK Q  E
Sbjct: 158 PISTKSQFLKHQQTHNIEKAHECTDCGKAFLKKSQLTE 195


>AF052384-1|AAC78786.1|  146|Homo sapiens IgM heavy chain variable
           region protein.
          Length = 146

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 24/78 (30%), Positives = 38/78 (48%)
 Frame = +1

Query: 274 VKEVFFSDPGQQLIMGIIARDLDHSDAEASITAGGIGFSYANIKLKSPRGSGLNYQLEIY 453
           + +V   + G  L+       L  S +  SI++G   +S+    L+ P G GL Y  +IY
Sbjct: 18  LSQVQLHESGPGLVKPSETLSLTCSVSGDSISSGSYYWSW----LRQPAGKGLEYIGQIY 73

Query: 454 T*KSYTLDHSFQSRSFLS 507
           T  S T + S +SR  +S
Sbjct: 74  TSGSTTYNPSLKSRVTIS 91


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,121,880
Number of Sequences: 237096
Number of extensions: 1925405
Number of successful extensions: 3607
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3607
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)