Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_D05
(887 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.024
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.22
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 30 0.38
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.51
SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr 2|... 27 2.7
SPBC3H7.02 |||sulfate transporter |Schizosaccharomyces pombe|chr... 27 3.6
SPCC13B11.03c |||hydroxyacylglutathione hydrolase |Schizosacchar... 27 3.6
SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces pomb... 27 4.7
SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc... 27 4.7
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 4.7
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 4.7
SPAC4H3.02c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 4.7
SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr 1||... 26 6.2
SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regula... 26 8.2
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 22 9.3
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.3 bits (75), Expect = 0.024
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 376 PGDQMPDLDVPVPEKTPPPSEAPRDSPSPTEPPK 477
P +++P L P P PPPS SP P PP+
Sbjct: 241 PPERVPSLSAPAPPPIPPPSNGTVSSP-PNSPPR 273
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.1 bits (67), Expect = 0.22
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 8/43 (18%)
Frame = +1
Query: 370 PAPGDQMPDL--DVPVPE------KTPPPSEAPRDSPSPTEPP 474
PAP Q+P +VPVP + PP S AP +PS T PP
Sbjct: 1479 PAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPP 1521
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +1
Query: 373 APGDQMPDLDVPVPEKTPPPSEAPRDSPSPTEP 471
AP P + VP P PP P +P P P
Sbjct: 1704 APTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 30.3 bits (65), Expect = 0.38
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 370 PAPGDQMPDLDVPVPEKTPPPSEAPRDSPSPTEPPKLN 483
P P + +P+ P+P + P P E + P P EPP N
Sbjct: 108 PLPNEPVPE--EPLPGEPPLPDEPVPEEPLPGEPPLPN 143
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 370 PAPGDQMPDLDVPVPEKTPPPSEAPRDSPSPTEP-PKLN 483
P P + +P + P+P++ P P + P P EP P+ N
Sbjct: 113 PVPEEPLPG-EPPLPDEPVPEEPLPGEPPLPNEPVPETN 150
Score = 27.5 bits (58), Expect = 2.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 406 PVPEKTPPPSEAPRDSPSPTEPP 474
P+P + P P+E + P P EPP
Sbjct: 102 PLPREPPLPNEPVPEEPLPGEPP 124
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.9 bits (64), Expect = 0.51
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +1
Query: 367 APAPGDQMPDLDVPVPEKTPPPSEAPRDSPSPTEPPKL 480
+PA +P P+P PPP++ SP P L
Sbjct: 153 SPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSL 190
Score = 26.2 bits (55), Expect = 6.2
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
Frame = +1
Query: 361 VIAPAPGDQMPDLDVPVPEKTPPP--SEAP----RDSPSPTEPP 474
V +P +P P+P K PPP S+AP PS PP
Sbjct: 181 VKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPP 224
Score = 25.8 bits (54), Expect = 8.2
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +1
Query: 370 PAPGDQMPDLDVPVPEKTPP-PSEAPRDSPSPTEPP 474
P P + P P PP PS+AP PS PP
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAP-PIPSSLPPP 174
>SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 997
Score = 27.5 bits (58), Expect = 2.7
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +1
Query: 190 GKPGQYIGKVDDGSPAETAGLKRGDRILEVNGHSIAGETHKQVVARIKERPDD 348
G G Y+G + GSPA L+ I+ V+GH I T + E+P D
Sbjct: 895 GPEGVYVGSILYGSPALNM-LRAAHWIVAVDGHDI--NTFDDFYHMLLEKPTD 944
>SPBC3H7.02 |||sulfate transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 877
Score = 27.1 bits (57), Expect = 3.6
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +1
Query: 367 APAPGDQMPDLDVPVPEKTPPPSEAPRDSPSPTEPPKLNLQMTAAEMRAHLAA 525
A P D+ PD VP PPPS P PT ++ + T + H A+
Sbjct: 15 ADLPQDEAPD---SVPGLVPPPSNFVPVYPEPTYSDTVSKKGTIVRVVRHTAS 64
>SPCC13B11.03c |||hydroxyacylglutathione hydrolase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 256
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 647 KQQHRRVDAXCTLITHHHSFFTMSNLDLR 561
K +++ +D L THHH+ + NL+L+
Sbjct: 48 KLKNKEIDLQAILTTHHHADHSGGNLNLK 76
>SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1254
Score = 26.6 bits (56), Expect = 4.7
Identities = 17/85 (20%), Positives = 36/85 (42%)
Frame = +1
Query: 49 RERAALLARTPTTDMSANGSAAIEPRLCHVRKTPDFDGYGFNLHAEKGKPGQYIGKVDDG 228
R A+ AR ++ A+ + + K PD + +HA + KP ++ ++
Sbjct: 716 RSGTAINARLDVVELIADNPVIRDTIWGFLHKLPDLERLISRVHAGRSKPADFVRVLEGF 775
Query: 229 SPAETAGLKRGDRILEVNGHSIAGE 303
+A + + +EV ++ GE
Sbjct: 776 QRINSAFDQLREEFMEVAEGTLLGE 800
>SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 150
Score = 26.6 bits (56), Expect = 4.7
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 367 APAPGDQMPDL--DVPVPEKTPPPSEAPRDSPSPTEPPKLNLQMTAAE 504
AP P P+ + + PP S+A R P PTEPP + T++E
Sbjct: 78 APPPYTAEPEARYNSTIHNPMPPMSQAYR--PPPTEPPTVPAYETSSE 123
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 340 PDDAELLVIAPAPGDQMPDLDVPVPEKTPPPSEAPRDSPSP 462
P L I APG MP+L++ P PP P P+P
Sbjct: 500 PPGVPLPPIPGAPG--MPNLNMSQPPMVPPGMALPPGMPAP 538
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +1
Query: 343 DDAELLVIAPAPGDQMPDLDVPVPEKTPPPSEAP-RDSPSPTEPP 474
+ +LL+ +P P + P P P P AP P P PP
Sbjct: 723 EQQKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
>SPAC4H3.02c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 391
Score = 26.6 bits (56), Expect = 4.7
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +1
Query: 337 RPDDAELLVIAPAPGDQMPDLDV-----PVPEKTPPPSEAPRD-SPSPTEP 471
RPD +L +PG + LD+ P PE PP++ P D SP EP
Sbjct: 146 RPDSQKL-----SPGKEKNTLDLKHCLLPSPEYKAPPAKKPEDYEASPGEP 191
>SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 992
Score = 26.2 bits (55), Expect = 6.2
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +1
Query: 289 SIAGETHKQVVARIKERPDDAELLVIAPAPGDQMPDLDVPVPEKTPPPSEAPRDSPSPTE 468
S++ ET ++ +++KE + L + Q P +P + + AP+ SP +
Sbjct: 574 SLSEETKQEKPSKLKETVESKRL---STGVQKQSPAASKEIPVTSGSQTTAPKPSPWKSL 630
Query: 469 PPK 477
PPK
Sbjct: 631 PPK 633
>SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regulator
Prp45|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 25.8 bits (54), Expect = 8.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 494 PRPRCEHISPPRRSSXLRKCRWTLGPSLTS*RNCDG 601
P P H SPPR+ S + W + PS+++ +N G
Sbjct: 229 PPPPVLH-SPPRKVSAQEQQDWQIPPSISNWKNPKG 263
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 22.2 bits (45), Expect(2) = 9.3
Identities = 10/29 (34%), Positives = 12/29 (41%)
Frame = +1
Query: 409 VPEKTPPPSEAPRDSPSPTEPPKLNLQMT 495
+P P P +P P PP L Q T
Sbjct: 223 IPPTYTPKQADPLPAPPPPPPPTLPPQST 251
Score = 21.4 bits (43), Expect(2) = 9.3
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +1
Query: 367 APAPGDQMPDLDVPVPEKTPPPS 435
A AP +P P P PPP+
Sbjct: 176 AAAPATSLPSDYNPPPPPPPPPA 198
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,059,035
Number of Sequences: 5004
Number of extensions: 56100
Number of successful extensions: 246
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 233
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 446488370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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