Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_D03
(867 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 45 9e-05
11_01_0750 - 6315126-6315896,6316371-6316784 39 0.006
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 34 0.17
11_02_0012 - 7346282-7347136,7347234-7347593 33 0.30
01_01_1152 + 9170628-9171899 33 0.30
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 33 0.39
11_02_0011 - 7337618-7338496,7338596-7338991 31 1.6
09_06_0317 - 22265786-22267618,22267874-22268446,22268546-222686... 30 2.8
11_01_0771 + 6453130-6454488 29 4.8
01_01_1013 - 8015552-8015613,8016898-8018035 29 4.8
11_02_0014 - 7352619-7352918,7353173-7353418 29 6.4
09_02_0226 - 6007656-6008063,6012166-6012678 28 8.4
01_06_1263 + 35840502-35841308,35841763-35841969,35842272-358423... 28 8.4
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 44.8 bits (101), Expect = 9e-05
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +2
Query: 425 ANKIYVSDQYKLADAFSRT-ANLFRSEVDNIXFSAP-KNAADIINRWADEQTQGHIKTPV 598
AN ++V +L A++R A+ +R+E + F + A IN W + T G IK +
Sbjct: 102 ANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFESATAGRIKDFL 161
Query: 599 SEDKIDPATAVAMFNVIFFQG 661
+D +D AT + N ++F+G
Sbjct: 162 PKDAVDRATPAVLGNALYFKG 182
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 38.7 bits (86), Expect = 0.006
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Frame = +2
Query: 377 LLNQRYAEFDPKFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNIXF-SAPKNAADII 550
+L R P+ L A ++ L+ F A N++ S F + P++A D I
Sbjct: 88 VLRDRSTSGGPR-LAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQI 146
Query: 551 NRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQG 661
N W + T+G + T + ID T + + + ++F+G
Sbjct: 147 NSWVKDSTKGTVTTLLPAGTIDQNTGLVLGSALYFRG 183
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 33.9 bits (74), Expect = 0.17
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 539 ADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGA 664
A +N W D T G IK + +D T + + N ++F+GA
Sbjct: 6 ASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGA 47
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 33.1 bits (72), Expect = 0.30
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +2
Query: 527 PKNAADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQG 661
PK++ IN+W + T I+ + + + TA+ + N I+F+G
Sbjct: 121 PKSSRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKG 165
>01_01_1152 + 9170628-9171899
Length = 423
Score = 33.1 bits (72), Expect = 0.30
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +2
Query: 527 PKNAADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQG 661
P+ A + +N + + T+G I+ + + +D +T V + N + F+G
Sbjct: 156 PEQARERVNAFVSDATEGLIRDVLPPNSVDSSTVVVLANAVHFKG 200
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 539 ADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGA 664
A +N W ++ T G IK + +D T + + N ++F+GA
Sbjct: 214 ASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGA 255
Score = 32.7 bits (71), Expect = 0.39
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 548 INRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGALA 670
+N W D T G IK + I+ T + + N ++F+GA A
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWA 509
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 527 PKNAADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQG 661
PK + IN+W + T I + + + TA+ + N I+F+G
Sbjct: 133 PKRSRKKINKWVSKATNKLIPEILPDGSVHVDTALVLVNAIYFKG 177
>09_06_0317 -
22265786-22267618,22267874-22268446,22268546-22268677,
22268931-22269137,22269287-22269388,22270742-22271032
Length = 1045
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2
Query: 359 TLEPPLPQGFPLSLPWTVHRLQTRTK 282
+L PPLP G PLS P+ QT K
Sbjct: 751 SLRPPLPPGLPLSSPFVCPTTQTSEK 776
>11_01_0771 + 6453130-6454488
Length = 452
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 548 INRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQG 661
IN WA T I + + P TAV + N I+F+G
Sbjct: 177 INAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKG 214
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 657 RGHWHVPFNASETEEKXFH 713
+G W PFN S+TE K F+
Sbjct: 213 KGKWDRPFNESDTERKPFY 231
>01_01_1013 - 8015552-8015613,8016898-8018035
Length = 399
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +1
Query: 205 ILKESYNLADDKNVIASPLGVMLL-LSLVRVWSRCTVQGRDKGNPWGRGGSRVN-THIRI 378
I K +++AD ++ S +L+ S+ +W+ V + PWG G V+ T +
Sbjct: 153 ITKTIFHVADLHPIVGSDKAALLIYFSVPEIWATHVVDYPPRDRPWGGNGVVVHKTIVWW 212
Query: 379 IKSALRRIRPEILDCRQ*NIRFRPV 453
+ + + +I RQ N+RF P+
Sbjct: 213 VDLSYGLLSCDISARRQ-NLRFVPL 236
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +2
Query: 527 PKNAADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQG 661
PK + IN W + T I + + + T + + N I+F+G
Sbjct: 83 PKKSRKKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKG 127
>09_02_0226 - 6007656-6008063,6012166-6012678
Length = 306
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 466 RVLQNSESVQKRSGQHXLQRSEECR*YHQPLGGRTDSRTHKDSCQRR 606
R L++ ++Q + + CR +PL R D RTH+ +C RR
Sbjct: 218 RPLKDFRTLQTHYKRKHCAKPFACRKCGKPLAVRGDWRTHEKNCGRR 264
>01_06_1263 +
35840502-35841308,35841763-35841969,35842272-35842370,
35843361-35843464,35844521-35844698,35844774-35845244,
35845383-35845523,35846290-35846349,35846427-35846490,
35847295-35847524,35847606-35847704
Length = 819
Score = 28.3 bits (60), Expect = 8.4
Identities = 20/80 (25%), Positives = 35/80 (43%)
Frame = +3
Query: 330 KSLGEGRLKSQHTHTDY*ISVTQNSTRNS*LSPIKYTFPTSISWPTRSPEQRICSEAKWT 509
K+ +G L +++ + + + +N T + S K P S S RSP +R S +
Sbjct: 375 KATADGILHTKNWDIEPLVPLPENITSTNLTSSAKDLSPFSFSTSRRSPSRRAKSRWEPV 434
Query: 510 TLXSALRRMPLISSTVGRTN 569
++ LIS +TN
Sbjct: 435 VEEKVANKVELISKESAKTN 454
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,153,767
Number of Sequences: 37544
Number of extensions: 489574
Number of successful extensions: 1271
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1271
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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