Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_D02
(876 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 67 4e-12
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 67 4e-12
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 67 4e-12
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 67 4e-12
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 67 4e-12
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 38 0.001
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 37 0.003
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.040
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.053
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.053
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 33 0.071
SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyce... 31 0.16
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.16
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 31 0.22
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.66
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.1
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 23 4.3
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 4.6
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 66.9 bits (156), Expect = 4e-12
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +2
Query: 206 PINRRLIFAGKQLEDGRTLSDYNIQKESTLHLVLK 310
P +RLIFAGKQLEDGRTLSDYNIQKESTLHLVL+
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Score = 42.3 bits (95), Expect = 9e-05
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +3
Query: 135 LXVEPSDTIENVKAKIQDKEGIP 203
L VE SDTI+NVK+KIQDKEGIP
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIP 37
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 66.9 bits (156), Expect = 4e-12
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +2
Query: 206 PINRRLIFAGKQLEDGRTLSDYNIQKESTLHLVLK 310
P +RLIFAGKQLEDGRTLSDYNIQKESTLHLVL+
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Score = 42.3 bits (95), Expect = 9e-05
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +3
Query: 135 LXVEPSDTIENVKAKIQDKEGIP 203
L VE SDTI+NVK+KIQDKEGIP
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIP 37
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 66.9 bits (156), Expect = 4e-12
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +2
Query: 206 PINRRLIFAGKQLEDGRTLSDYNIQKESTLHLVLK 310
P +RLIFAGKQLEDGRTLSDYNIQKESTLHLVL+
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Score = 42.3 bits (95), Expect = 9e-05
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +3
Query: 135 LXVEPSDTIENVKAKIQDKEGIP 203
L VE SDTI+NVK+KIQDKEGIP
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIP 37
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 66.9 bits (156), Expect = 4e-12
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +2
Query: 206 PINRRLIFAGKQLEDGRTLSDYNIQKESTLHLVLK 310
P +RLIFAGKQLEDGRTLSDYNIQKESTLHLVL+
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Score = 66.9 bits (156), Expect = 4e-12
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +2
Query: 206 PINRRLIFAGKQLEDGRTLSDYNIQKESTLHLVLK 310
P +RLIFAGKQLEDGRTLSDYNIQKESTLHLVL+
Sbjct: 114 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 148
Score = 66.9 bits (156), Expect = 4e-12
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +2
Query: 206 PINRRLIFAGKQLEDGRTLSDYNIQKESTLHLVLK 310
P +RLIFAGKQLEDGRTLSDYNIQKESTLHLVL+
Sbjct: 190 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 224
Score = 66.9 bits (156), Expect = 4e-12
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +2
Query: 206 PINRRLIFAGKQLEDGRTLSDYNIQKESTLHLVLK 310
P +RLIFAGKQLEDGRTLSDYNIQKESTLHLVL+
Sbjct: 266 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 300
Score = 66.9 bits (156), Expect = 4e-12
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +2
Query: 206 PINRRLIFAGKQLEDGRTLSDYNIQKESTLHLVLK 310
P +RLIFAGKQLEDGRTLSDYNIQKESTLHLVL+
Sbjct: 342 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 376
Score = 42.3 bits (95), Expect = 9e-05
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +3
Query: 135 LXVEPSDTIENVKAKIQDKEGIP 203
L VE SDTI+NVK+KIQDKEGIP
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIP 37
Score = 42.3 bits (95), Expect = 9e-05
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +3
Query: 135 LXVEPSDTIENVKAKIQDKEGIP 203
L VE SDTI+NVK+KIQDKEGIP
Sbjct: 91 LEVESSDTIDNVKSKIQDKEGIP 113
Score = 42.3 bits (95), Expect = 9e-05
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +3
Query: 135 LXVEPSDTIENVKAKIQDKEGIP 203
L VE SDTI+NVK+KIQDKEGIP
Sbjct: 167 LEVESSDTIDNVKSKIQDKEGIP 189
Score = 42.3 bits (95), Expect = 9e-05
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +3
Query: 135 LXVEPSDTIENVKAKIQDKEGIP 203
L VE SDTI+NVK+KIQDKEGIP
Sbjct: 243 LEVESSDTIDNVKSKIQDKEGIP 265
Score = 42.3 bits (95), Expect = 9e-05
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +3
Query: 135 LXVEPSDTIENVKAKIQDKEGIP 203
L VE SDTI+NVK+KIQDKEGIP
Sbjct: 319 LEVESSDTIDNVKSKIQDKEGIP 341
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 66.9 bits (156), Expect = 4e-12
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +2
Query: 206 PINRRLIFAGKQLEDGRTLSDYNIQKESTLHLVLK 310
P +RLIFAGKQLEDGRTLSDYNIQKESTLHLVL+
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 72
Score = 42.3 bits (95), Expect = 9e-05
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +3
Query: 135 LXVEPSDTIENVKAKIQDKEGIP 203
L VE SDTI+NVK+KIQDKEGIP
Sbjct: 15 LEVESSDTIDNVKSKIQDKEGIP 37
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 38.3 bits (85), Expect = 0.001
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 206 PINRRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 307
P +RLI+AGKQ+ D + Y+++ S LHLVL
Sbjct: 38 PSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVL 71
Score = 31.1 bits (67), Expect = 0.22
Identities = 9/23 (39%), Positives = 18/23 (78%)
Frame = +3
Query: 135 LXVEPSDTIENVKAKIQDKEGIP 203
L ++P+D + +K ++++KEGIP
Sbjct: 15 LDIDPNDKVSRIKERVEEKEGIP 37
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 37.1 bits (82), Expect = 0.003
Identities = 24/73 (32%), Positives = 24/73 (32%), Gaps = 2/73 (2%)
Frame = -1
Query: 837 GGGGXXXPXPRGXG--GXXGXXGXXXXXXXGXGGGXXXXXXXGXGXGXXXXXXEKXXXXX 664
GG G P P G G G G G G GGG G G
Sbjct: 195 GGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGF 254
Query: 663 XGGXGXXGGGGGG 625
GG G GGG GG
Sbjct: 255 GGGPGGFGGGPGG 267
Score = 25.8 bits (54), Expect = 8.1
Identities = 20/58 (34%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Frame = -3
Query: 748 GGGXXXXXXXGGXXWXXGEXXG-KXXXGXXGGGWXXXGGGGGGXXXXGGXGFXXXPXG 578
GG GG G G + G GGG GGG GG G GF P G
Sbjct: 211 GGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPG-GFGGGPGG 267
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.5 bits (73), Expect = 0.040
Identities = 38/181 (20%), Positives = 41/181 (22%), Gaps = 1/181 (0%)
Frame = +1
Query: 295 PPGVEGFXVAPKKPQKKNYSPTPXRSXPXKXKGXPNPXXPVFTRVHQKXVKIPPXXXGXX 474
PP + AP P + S P P P V + V PP
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSV 1109
Query: 475 XXPGA-TPXXAPXXXXXGXXXXXXPPXXXGGXXSXTPQGXPXXPXPXXXXXPPPPPPXXA 651
P P AP P G P P PP P P A
Sbjct: 1110 AVPPVPAPSGAPPVPKPSVAAPPVP--VPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVA 1167
Query: 652 XPPPPXXXXFFPXXXXXXXXXPXXXXXXXXPPXXXXXXXXXXXXXPXPXPPXXGXXXXPP 831
PP P P P PP P PP P
Sbjct: 1168 APPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLP 1227
Query: 832 P 834
P
Sbjct: 1228 P 1228
Score = 33.5 bits (73), Expect = 0.040
Identities = 24/99 (24%), Positives = 25/99 (25%)
Frame = +3
Query: 450 PPPXXGXXXXPXGNPXXGPPXXFXXXXXXXXPPXXXGGXXFXXPXGXXXXPXPPXXXXPP 629
P P P P PP P G P P PP PP
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVP-PVPPPSEAPP 1199
Query: 630 PPPPXXXXPPPXXPXXXFPXXSPXXXXXPPXXXXXXXPP 746
P P PP P P +P P PP
Sbjct: 1200 VPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 33.1 bits (72), Expect = 0.053
Identities = 26/115 (22%), Positives = 30/115 (26%), Gaps = 2/115 (1%)
Frame = +2
Query: 536 GXPPPPXXGXXXLXPXRXXLKXPXPXXXXXPPPPPPXXPXPPXXXXXXFSXXLXXXPX-- 709
G PP P P P P PP P PP + +
Sbjct: 1081 GAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP 1140
Query: 710 PSPXXXXSXXPPPXPXXXXXXXPXXPXXPPXPRGXGXXLPPPPXXRGXXXXXPPP 874
P P + P P P PP P +PP P PPP
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP-APSSGIPPVPKPAAGVPPVPPP 1194
Score = 29.9 bits (64), Expect = 0.50
Identities = 26/129 (20%), Positives = 28/129 (21%)
Frame = +3
Query: 450 PPPXXGXXXXPXGNPXXGPPXXFXXXXXXXXPPXXXGGXXFXXPXGXXXXPXPPXXXXPP 629
PP P P P P P G P P PP
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAA-PP 1170
Query: 630 PPPPXXXXPPPXXPXXXFPXXSPXXXXXPPXXXXXXXPPPXXXXXXXXXPXXPXXXPXXX 809
P P PP P P P P PP P P
Sbjct: 1171 VPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Query: 810 GXXXXSPPL 836
+PP+
Sbjct: 1231 VPTAKAPPV 1239
Score = 28.7 bits (61), Expect = 1.1
Identities = 41/193 (21%), Positives = 44/193 (22%), Gaps = 6/193 (3%)
Frame = +1
Query: 277 PEGIHPPPGVEGFXVAPKKPQKKNYSPTPXRSXPXKXKGXPNPXXPVFTRVHQKXVKIPP 456
P G P P G PK P P + P P P V V +P
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPK-PSVAAPPVPVPS 1137
Query: 457 XXX-----GXXXXPGATPXXAPXXXXXGXXXXXXPPXXXGGXXSXTPQ-GXPXXPXPXXX 618
P P AP P G P G P P P
Sbjct: 1138 GAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEA 1197
Query: 619 XXPPPPPPXXAXPPPPXXXXFFPXXXXXXXXXPXXXXXXXXPPXXXXXXXXXXXXXPXPX 798
PP P P PP P P P PP P
Sbjct: 1198 --PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSS 1255
Query: 799 PPXXGXXXXPPPS 837
P P P+
Sbjct: 1256 VPSPHSNASPSPT 1268
Score = 27.1 bits (57), Expect = 3.5
Identities = 23/97 (23%), Positives = 25/97 (25%), Gaps = 6/97 (6%)
Frame = +2
Query: 602 PXPXXXXXPPPPP------PXXPXPPXXXXXXFSXXLXXXPXPSPXXXXSXXPPPXPXXX 763
P P PP P P P P P S + P P P
Sbjct: 1013 PVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSE 1072
Query: 764 XXXXPXXPXXPPXPRGXGXXLPPPPXXRGXXXXXPPP 874
P PP P G +PP P P P
Sbjct: 1073 IPSIPAPSGAPPVPAPSG--IPPVPKPSVAAPPVPKP 1107
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.1 bits (72), Expect = 0.053
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 577 TPQGXPXXPXPXXXXXPPPPPPXXAXPPPP 666
TP P P P PPPP + PPPP
Sbjct: 1689 TPPVRPQSAAPPQMSAPTPPPPPMSVPPPP 1718
Score = 29.5 bits (63), Expect = 0.66
Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Frame = +3
Query: 606 PPXXXXP-PPPPPXXXXPPPXXP 671
PP P PPPPP PPP P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAP 1721
Score = 29.1 bits (62), Expect = 0.87
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 600 PXPPXXXXPPPPPPXXXXPPPXXPXXXFPXXSPXXXXXP 716
P PP PPP P PP P P S P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/45 (28%), Positives = 13/45 (28%)
Frame = +2
Query: 740 PPPXPXXXXXXXPXXPXXPPXPRGXGXXLPPPPXXRGXXXXXPPP 874
PP P P PP P PP G PPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 25.8 bits (54), Expect = 8.1
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 6/35 (17%)
Frame = +1
Query: 580 PQGXPXXPXPXXXXXPPPP--PPXXA----XPPPP 666
PQ P P PPPP PP A PPPP
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +3
Query: 624 PPPPPPXXXXPPPXXPXXXFPXXSP 698
PPPPP PP P P +P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAP 1731
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.1 bits (72), Expect = 0.053
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = +2
Query: 626 PPPPPPXXPXPPXXXXXXFSXXLXXXPXPSPXXXXSXXPPPXPXXXXXXXPXXPXXPPXP 805
PPPPPP P P P+P PPP P P P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPI------PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAV 785
Query: 806 RGXG 817
G
Sbjct: 786 SAGG 789
Score = 32.7 bits (71), Expect = 0.071
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +3
Query: 624 PPPPPPXXXXPPPXXPXXXFPXXSPXXXXXPPXXXXXXXPPPXXXXXXXXXPXXPXXXP 800
PPPPPP P P P +P PP PPP P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPP-------PPPPPGVAGAGPPPPPPPPP 783
Score = 31.9 bits (69), Expect = 0.12
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +2
Query: 710 PSPXXXXSXXPPPXPXXXXXXXPXXPXXPPXPRGXGXXLPPPP 838
P+P PPP P P P PP G G PPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGG---PPPPPPPPGVAGAGPPPPPPP 781
Score = 31.5 bits (68), Expect = 0.16
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 3/48 (6%)
Frame = +2
Query: 740 PPPXPXXXXXXXPXX---PXXPPXPRGXGXXLPPPPXXRGXXXXXPPP 874
PPP P P P PP P G PPPP PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 31.1 bits (67), Expect = 0.22
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +2
Query: 542 PPPPXXGXXXLXPXRXXLKXPXPXXXXXPPPPPPXXP 652
PPPP P + P P PPPPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 30.7 bits (66), Expect = 0.28
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Frame = +2
Query: 692 LXXXPXPSPXXXXSXXPPPXPXXXXXXXPXX--PXXPPXPRGXGXXLPPPP 838
L P P P P P P P P PP P G PPPP
Sbjct: 728 LLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 28.7 bits (61), Expect = 1.1
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 600 PXPPXXXXPPPPPPXXXXPPPXXPXXXFPXXSPXXXXXPPXXXXXXXPPP 749
P PP P P P PP P P P PP PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP----PPPGVAGAGPPPP 778
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +3
Query: 600 PXPPXXXXPPPPPPXXXXPPPXXPXXXFPXXSPXXXXXPP 719
P P PPP P PPP P P PP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Frame = +1
Query: 592 PXXPXPXXXXXPPPPP-PXXAXPPPP 666
P P PPPPP A PPPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPP 778
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 32.7 bits (71), Expect = 0.071
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 215 RRLIFAGKQLEDGRTLSDYNIQKESTLHLV 304
+RLI+AG+ L+D +L Y IQ ++HLV
Sbjct: 44 QRLIYAGRVLKDEESLKTYKIQDGHSIHLV 73
>SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 31.5 bits (68), Expect = 0.16
Identities = 29/112 (25%), Positives = 42/112 (37%), Gaps = 9/112 (8%)
Frame = +1
Query: 97 IFRKDPHGQDHHPXRSSRQIPSRM*KLKFKTKRESP---------PNQQEVDLCWKAAGR 249
++ D H +D+ SS I M + + SP ++QE D+ A
Sbjct: 353 VYDVDTHSEDNASTASSEAISQSMRSFQPQPNTGSPFPRFTSTNTEDEQESDIPQSDAND 412
Query: 250 WTYPLGLQYPEGIHPPPGVEGFXVAPKKPQKKNYSPTPXRSXPXKXKGXPNP 405
T L + P P V+PK+P SP P S P G P+P
Sbjct: 413 STVNLNQPNYANLTPTP-----QVSPKRPTYSRSSPLPSASVPALGDGSPDP 459
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.5 bits (68), Expect = 0.16
Identities = 23/85 (27%), Positives = 25/85 (29%), Gaps = 3/85 (3%)
Frame = +2
Query: 626 PPPPPPXXPX--PPXXXXXXFSXXLXXXPXPSPXXXXSXXPPPXPXXXXXXXP-XXPXXP 796
PP PPP P P + P P+P PP P P P P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 797 PXPRGXGXXLPPPPXXRGXXXXXPP 871
P P PP P PP
Sbjct: 448 PLPPS-APIAPPLPAGMPAAPPLPP 471
Score = 31.1 bits (67), Expect = 0.22
Identities = 37/161 (22%), Positives = 41/161 (25%), Gaps = 5/161 (3%)
Frame = +2
Query: 404 PXXRFLXGSTKXRXKSPPXXGXXXXPXGQPLXGPPXXXXXXXXXGXPPPPXXGXXXLXPX 583
P R + K PP P + G P PPPP
Sbjct: 295 PSSRVSAAALAANKKRPPPP----PPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAA-- 348
Query: 584 RXXLKXPXPXXXXXPPPPPPXXPXP-PXXXXXXFSXXLXXXPXPSPXXXXSXXP--PPXP 754
+ P PPPPP P S + P P P P PP
Sbjct: 349 -GSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLG 407
Query: 755 XXXXXXXPXXPXXPPXPRGXGXXLPP--PPXXRGXXXXXPP 871
P P P P LPP PP PP
Sbjct: 408 NASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Score = 28.3 bits (60), Expect = 1.5
Identities = 19/74 (25%), Positives = 21/74 (28%)
Frame = +2
Query: 440 RXKSPPXXGXXXXPXGQPLXGPPXXXXXXXXXGXPPPPXXGXXXLXPXRXXLKXPXPXXX 619
R +PP P P PP PP P + P P
Sbjct: 411 RTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPL-------PPSAPIAPPLPAGM 463
Query: 620 XXPPPPPPXXPXPP 661
PP PP P PP
Sbjct: 464 PAAPPLPPAAPAPP 477
Score = 27.9 bits (59), Expect = 2.0
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +1
Query: 544 PPXXXGGXXSXTPQGXPXXPXPXXXXXPPPPPPXXAXPPPP 666
PP G S P P P PP A PPPP
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Score = 27.9 bits (59), Expect = 2.0
Identities = 32/134 (23%), Positives = 37/134 (27%), Gaps = 9/134 (6%)
Frame = +1
Query: 292 PPPGVEGFXVAPKKPQKKNYSPTPX-RSXPXKXKGXPNPXXPVFTRVHQKXVKIPPXXXG 468
PPP P PQ ++ P P RS P + P P+ + PP
Sbjct: 341 PPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPP----PLSSSRAVSNPPAPPPAIP 396
Query: 469 XXXXPGATPXX------APXXXXXGXXXXXXPPXXXGGXXSXTPQGXPXXP--XPXXXXX 624
P P P PP P G P P P
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIA 456
Query: 625 PPPPPPXXAXPPPP 666
PP P A PP P
Sbjct: 457 PPLPAGMPAAPPLP 470
Score = 27.5 bits (58), Expect = 2.7
Identities = 18/78 (23%), Positives = 21/78 (26%)
Frame = +2
Query: 638 PPXXPXPPXXXXXXFSXXLXXXPXPSPXXXXSXXPPPXPXXXXXXXPXXPXXPPXPRGXG 817
PP P + P P P + PP P PP G
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAG 349
Query: 818 XXLPPPPXXRGXXXXXPP 871
+P PP R PP
Sbjct: 350 -SIPLPPQGRSAPPPPPP 366
Score = 27.1 bits (57), Expect = 3.5
Identities = 24/82 (29%), Positives = 25/82 (30%)
Frame = +2
Query: 629 PPPPPXXPXPPXXXXXXFSXXLXXXPXPSPXXXXSXXPPPXPXXXXXXXPXXPXXPPXPR 808
PPPPP PP S P S PPP P P P +
Sbjct: 311 PPPPP----PP-------SRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPP---Q 356
Query: 809 GXGXXLPPPPXXRGXXXXXPPP 874
G PPPP PPP
Sbjct: 357 GRSAPPPPPPRSAPSTGRQPPP 378
Score = 26.2 bits (55), Expect = 6.1
Identities = 20/83 (24%), Positives = 20/83 (24%)
Frame = +2
Query: 626 PPPPPPXXPXPPXXXXXXFSXXLXXXPXPSPXXXXSXXPPPXPXXXXXXXPXXPXXPPXP 805
PPPPPP P P P S P P P PP
Sbjct: 337 PPPPPPPRSNAAGSIPLP-PQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAI 395
Query: 806 RGXGXXLPPPPXXRGXXXXXPPP 874
G PP P P
Sbjct: 396 PGRSAPALPPLGNASRTSTPPVP 418
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/40 (30%), Positives = 13/40 (32%)
Frame = +3
Query: 600 PXPPXXXXPPPPPPXXXXPPPXXPXXXFPXXSPXXXXXPP 719
P PP PP P PP P P +P P
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 31.1 bits (67), Expect = 0.22
Identities = 21/83 (25%), Positives = 22/83 (26%)
Frame = +2
Query: 626 PPPPPPXXPXPPXXXXXXFSXXLXXXPXPSPXXXXSXXPPPXPXXXXXXXPXXPXXPPXP 805
PPPP P P P PP P P PP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP--PPMH 265
Query: 806 RGXGXXLPPPPXXRGXXXXXPPP 874
G +PPPP PPP
Sbjct: 266 HEPGEHMPPPPMHHEPGEHMPPP 288
Score = 31.1 bits (67), Expect = 0.22
Identities = 21/83 (25%), Positives = 22/83 (26%)
Frame = +2
Query: 626 PPPPPPXXPXPPXXXXXXFSXXLXXXPXPSPXXXXSXXPPPXPXXXXXXXPXXPXXPPXP 805
PPPP P P P PP P P PP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP--PPMH 278
Query: 806 RGXGXXLPPPPXXRGXXXXXPPP 874
G +PPPP PPP
Sbjct: 279 HEPGEHMPPPPMHHEPGEHMPPP 301
Score = 31.1 bits (67), Expect = 0.22
Identities = 21/83 (25%), Positives = 22/83 (26%)
Frame = +2
Query: 626 PPPPPPXXPXPPXXXXXXFSXXLXXXPXPSPXXXXSXXPPPXPXXXXXXXPXXPXXPPXP 805
PPPP P P P PP P P PP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP--PPMH 291
Query: 806 RGXGXXLPPPPXXRGXXXXXPPP 874
G +PPPP PPP
Sbjct: 292 HEPGEHMPPPPMHHEPGEHMPPP 314
Score = 31.1 bits (67), Expect = 0.22
Identities = 21/83 (25%), Positives = 22/83 (26%)
Frame = +2
Query: 626 PPPPPPXXPXPPXXXXXXFSXXLXXXPXPSPXXXXSXXPPPXPXXXXXXXPXXPXXPPXP 805
PPPP P P P PP P P PP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP--PPMH 304
Query: 806 RGXGXXLPPPPXXRGXXXXXPPP 874
G +PPPP PPP
Sbjct: 305 HEPGEHMPPPPMHHEPGEHMPPP 327
Score = 31.1 bits (67), Expect = 0.22
Identities = 21/83 (25%), Positives = 22/83 (26%)
Frame = +2
Query: 626 PPPPPPXXPXPPXXXXXXFSXXLXXXPXPSPXXXXSXXPPPXPXXXXXXXPXXPXXPPXP 805
PPPP P P P PP P P PP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP--PPMH 317
Query: 806 RGXGXXLPPPPXXRGXXXXXPPP 874
G +PPPP PPP
Sbjct: 318 HEPGEHMPPPPMHHEPGEHMPPP 340
Score = 26.2 bits (55), Expect = 6.1
Identities = 18/71 (25%), Positives = 19/71 (26%)
Frame = +2
Query: 626 PPPPPPXXPXPPXXXXXXFSXXLXXXPXPSPXXXXSXXPPPXPXXXXXXXPXXPXXPPXP 805
PPPP P P P PP P P PP
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP--PPMH 330
Query: 806 RGXGXXLPPPP 838
G +PPPP
Sbjct: 331 HEPGEHMPPPP 341
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.5 bits (63), Expect = 0.66
Identities = 20/79 (25%), Positives = 22/79 (27%)
Frame = +2
Query: 602 PXPXXXXXPPPPPPXXPXPPXXXXXXFSXXLXXXPXPSPXXXXSXXPPPXPXXXXXXXPX 781
P P PP P P P P +P S PP P P
Sbjct: 131 PTPQSELRPPTSAPPRPSIPPPSPAS----APPIPSKAPPIPSSLPPPAQPAAPVKSPPS 186
Query: 782 XPXXPPXPRGXGXXLPPPP 838
P P +PPPP
Sbjct: 187 APSLPSAVPPMPPKVPPPP 205
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/32 (37%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Frame = +1
Query: 571 SXTPQGXPXXPXPXXXXXPP-PPPPXXAXPPP 663
S P P P P PP PP + PPP
Sbjct: 121 SAAPPSAPAPPTPQSELRPPTSAPPRPSIPPP 152
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
Frame = +3
Query: 606 PPXXXXPPPPPPXXXXP--PPXXP 671
PP PPPPPP P PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +3
Query: 579 PXGXXXXPXPPXXXXPP--PPPPXXXXPPP 662
P G P PP PP PPPP PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP----PPP 30
Score = 26.6 bits (56), Expect = 4.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 571 SXTPQGXPXXPXPXXXXXPPPPPPXXAXPPPP 666
S P P P P P PPP PPPP
Sbjct: 3 SLPPGNPPPPPPPPGFEPPSQPPP----PPPP 30
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 22.6 bits (46), Expect(2) = 4.3
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = +3
Query: 627 PPPPPXXXXPPPXXPXXXFPXXS 695
PPPPP PP P S
Sbjct: 238 PPPPPPPTLPPQSTNTSQLPMPS 260
Score = 22.2 bits (45), Expect(2) = 4.3
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 609 PXXXXPPPPPP 641
P PPPPPP
Sbjct: 234 PLPAPPPPPPP 244
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.6 bits (56), Expect = 4.6
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = -1
Query: 804 GXGGXXGXXGXXXXXXXGXGGGXXXXXXXGXGXGXXXXXXEKXXXXXXGGXGXXGGGGGG 625
G GG G G G GGG G G GG G GG GG
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGR---GGARGGRGGSSGGRGG 66
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,733,963
Number of Sequences: 5004
Number of extensions: 57385
Number of successful extensions: 583
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 292
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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