Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_D01
(879 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 39 0.001
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.12
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.16
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.50
SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces... 29 1.2
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.5
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 28 1.5
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 28 2.0
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 28 2.0
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 2.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 6.1
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 26 8.1
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 38.7 bits (86), Expect = 0.001
Identities = 20/55 (36%), Positives = 21/55 (38%)
Frame = +3
Query: 513 PPPXXPPPXIXXXFPXFPXPXXTXPPXPXXXTXGTXPPXXXXXXQXPPPPPXXXP 677
PPP PPP + P P P PP P PP PPPPP P
Sbjct: 732 PPP--PPPAVIVPTPA-PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 23.8 bits (49), Expect(2) = 0.92
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 492 PSXXGLXPPPXXPPP 536
P G PPP PPP
Sbjct: 768 PGVAGAGPPPPPPPP 782
Score = 23.4 bits (48), Expect(2) = 0.92
Identities = 9/28 (32%), Positives = 11/28 (39%)
Frame = +3
Query: 513 PPPXXPPPXIXXXFPXFPXPXXTXPPXP 596
PPP PPP + + P P P
Sbjct: 776 PPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.9 bits (69), Expect = 0.12
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 762 GGXXXGGGXEGGGGGXXGGXAXXXGXGGEXXXXGGGGG 649
GG GG GG GG G GGE GG GG
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGG 225
Score = 29.5 bits (63), Expect = 0.66
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = -2
Query: 701 RXXXGXGVRXXXGGGGGGLXXXXXXGX-GGXXSXXXXXGGVGXXGGGEXXKXGXNXGGGG 525
R G G GG GG G GG GG G GGG G G GG
Sbjct: 183 RGHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGG 242
Query: 524 XRG 516
G
Sbjct: 243 GPG 245
Score = 29.5 bits (63), Expect = 0.66
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -1
Query: 762 GGXXXGGGXEGGGGGXXGGXAXXXGXGGEXXXXGGGGGXXXXXXXGXG 619
G GGG G GG G G GG GGG G G G
Sbjct: 222 GHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHG 269
Score = 29.1 bits (62), Expect = 0.87
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -1
Query: 744 GGXEGGGGGXXGGXAXXXGXGGEXXXXGGGGGXXXXXXXGXG 619
GG G GGG G G GG GGG G G G
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFG 262
Score = 28.7 bits (61), Expect = 1.2
Identities = 25/74 (33%), Positives = 26/74 (35%)
Frame = -2
Query: 746 GGGXRXGGGVXXGXXRXXXGXGVRXXXGGGGGGLXXXXXXGXGGXXSXXXXXGGVGXXGG 567
G G G G G G G GGG GG G GG GG+G GG
Sbjct: 203 GPGGFGGFGGFGGEGHHHGGHG---GFGGGPGGF-EGGPGGFGG--GPGGFGGGLGGFGG 256
Query: 566 GEXXKXGXNXGGGG 525
G G G GG
Sbjct: 257 GPGGFGGGPGGHGG 270
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 762 GGXXXGGGXEGGGGGXXGGXAXXXGXGGEXXXXGGGG 652
G GGG G GGG G G GG GG G
Sbjct: 236 GPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.5 bits (68), Expect = 0.16
Identities = 22/65 (33%), Positives = 25/65 (38%)
Frame = -2
Query: 710 GXXRXXXGXGVRXXXGGGGGGLXXXXXXGXGGXXSXXXXXGGVGXXGGGEXXKXGXNXGG 531
G R G G GG GGG G GG GG G GG + G + G
Sbjct: 12 GGSRGGRG-GFNGGRGGFGGGRGGARGGGRGG------ARGGRGGRGGARGGRGGSSGGR 64
Query: 530 GGXRG 516
GG +G
Sbjct: 65 GGAKG 69
Score = 30.7 bits (66), Expect = 0.29
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -1
Query: 762 GGXXXGGGXEGGGGGXXGGXAXXXGXGGEXXXXGGGGG 649
GG G GG GG GG A G GG GG GG
Sbjct: 16 GGRGGFNGGRGGFGGGRGG-ARGGGRGGARGGRGGRGG 52
Score = 29.9 bits (64), Expect = 0.50
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = -1
Query: 762 GGXXXGGGXEGG--GGGXXGGXAXXXGXGGEXXXXGGGGG 649
GG GG GG GGG G G GG GG G
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSG 62
Score = 29.9 bits (64), Expect = 0.50
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -1
Query: 759 GXXXGGGXEGGGGGXXGGXAXXXG-XGGEXXXXGGGGG 649
G GG GG GG GG G GG GG GG
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 29.5 bits (63), Expect = 0.66
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 762 GGXXXGGGXEGGGGGXXGGXAXXXGXGGEXXXXGGGGG 649
GG G G GG G GG GG GG GG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGG 49
Score = 29.1 bits (62), Expect = 0.87
Identities = 18/41 (43%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Frame = -1
Query: 762 GGXXXGGGXEGGG-GGXXGG--XAXXXGXGGEXXXXGGGGG 649
GG G G GGG GG GG G GG GG GG
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -1
Query: 762 GGXXXGGGXEGGGGGXXGGXAXXXGXGGEXXXXGGGGGXXXXXXXGXG 619
G GG GG GG GG GG GGG G G G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGF--GGGRGGARGGGRGGARGGRGGRG 51
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -1
Query: 759 GXXXGGGXEGGGGGXXGGXAXXXGXGGEXXXXGGGGG 649
G GGG G GG G G GG GG G
Sbjct: 33 GGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
Score = 27.9 bits (59), Expect = 2.0
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = -2
Query: 743 GGXRXGGGVXXGXXRXXXGXGVRXXXGGGGGGLXXXXXXGXGGXXSXXXXXGGVGXXGGG 564
GG R G G G R G G GGG GG G GG G GG
Sbjct: 12 GGSRGGRGGFNG-GRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.50
Identities = 20/67 (29%), Positives = 21/67 (31%), Gaps = 4/67 (5%)
Frame = +3
Query: 489 GPSXXGLXPPPXXPPPXIXXXFPXFPXPXXTXPPXP--XXXTXGTXPP--XXXXXXQXPP 656
G S L PPP P P P PP P + G PP PP
Sbjct: 330 GSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPP 389
Query: 657 PPPXXXP 677
PP P
Sbjct: 390 APPPAIP 396
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/60 (28%), Positives = 18/60 (30%), Gaps = 5/60 (8%)
Frame = +3
Query: 513 PPPXXPPPXIXXXFPXFPXPXXTX-----PPXPXXXTXGTXPPXXXXXXQXPPPPPXXXP 677
PPP PP P PP P G+ P PPPPP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/58 (25%), Positives = 20/58 (34%)
Frame = +3
Query: 492 PSXXGLXPPPXXPPPXIXXXFPXFPXPXXTXPPXPXXXTXGTXPPXXXXXXQXPPPPP 665
PS + PP PP I + PP P + + + PPPPP
Sbjct: 259 PSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPP 316
Score = 25.8 bits (54), Expect = 8.1
Identities = 17/64 (26%), Positives = 19/64 (29%), Gaps = 2/64 (3%)
Frame = +3
Query: 492 PSXXGLXPPPXXP--PPXIXXXFPXFPXPXXTXPPXPXXXTXGTXPPXXXXXXQXPPPPP 665
PS PP P PP + P P + P P P PPP P
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Query: 666 XXXP 677
P
Sbjct: 481 APAP 484
>SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 720
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 187 QKKILSFFQDVSQLNTDDEYYKIGKDY-DIEMNMDNYTNKKAVEEFLKMYRTGFMP*EFT 363
+ K+ D + L DD KD+ ++ +N +Y NK ++ F + + F P +
Sbjct: 617 EMKLSDKIDDANSLKDDDFIQGSKKDFFEMNLNHSSYQNKDELKPFQLLVKHAFKPPSYR 676
Query: 364 VXR 372
+ R
Sbjct: 677 LIR 679
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 1.5
Identities = 17/64 (26%), Positives = 19/64 (29%)
Frame = +3
Query: 492 PSXXGLXPPPXXPPPXIXXXFPXFPXPXXTXPPXPXXXTXGTXPPXXXXXXQXPPPPPXX 671
P + PP P I P P P PP + P PP PP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAP--PIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKV 201
Query: 672 XPHP 683
P P
Sbjct: 202 PPPP 205
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 28.3 bits (60), Expect = 1.5
Identities = 25/78 (32%), Positives = 26/78 (33%), Gaps = 2/78 (2%)
Frame = -2
Query: 740 GXRXGGGVXXGXXRXXXGXGVRXXXGGGGGGLXXXXXXGXGGXXSXXXXXGGVGXXGGGE 561
G + G G G R GG GG G GG GG G GG
Sbjct: 123 GPKKPKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGG-----GSRGGFG--GGSR 175
Query: 560 XXKXGXNXGG--GGXRGR 513
G GG GG RGR
Sbjct: 176 GGSRGGFRGGSRGGFRGR 193
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -1
Query: 759 GXXXGGGXEGGGGGXXGGXAXXXGXGGEXXXXGGGGG 649
G G GG GG GG G G G GGG
Sbjct: 129 GARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGG 165
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -1
Query: 762 GGXXXGGGXEGGGGGXXGGXAXXXGXGGEXXXXGGG 655
GG G GG G GG + GG GGG
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGG 173
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Frame = -3
Query: 274 RYHSLCQFYNIHHQ--CLVGSHLG 209
+Y++ C FYNI H C G LG
Sbjct: 35 KYYNFCPFYNIQHNYTCQTGDPLG 58
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -1
Query: 747 GGGXEGGGGGXXGGXAXXXGXGGEXXXXGGGGG 649
GGG GG GG GG G GG G G G
Sbjct: 446 GGGSRGGRGG-FGGRGGFGGRGGFGGGRGRGRG 477
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 2.0
Identities = 16/55 (29%), Positives = 17/55 (30%)
Frame = +3
Query: 513 PPPXXPPPXIXXXFPXFPXPXXTXPPXPXXXTXGTXPPXXXXXXQXPPPPPXXXP 677
P PP P P P PP P + G P P PPP P
Sbjct: 1145 PSVAAPPVPAPSGAPPVPKPSVAAPPVP-APSSGIPPVPKPAAGVPPVPPPSEAP 1198
Score = 25.8 bits (54), Expect = 8.1
Identities = 15/56 (26%), Positives = 15/56 (26%)
Frame = +3
Query: 516 PPXXPPPXIXXXFPXFPXPXXTXPPXPXXXTXGTXPPXXXXXXQXPPPPPXXXPHP 683
P PP P P P PP P PP P P P P
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAPPVPKPSV--AVPPVPAPSGAPPVPKPSVAAPP 1132
Score = 25.8 bits (54), Expect = 8.1
Identities = 17/68 (25%), Positives = 19/68 (27%), Gaps = 4/68 (5%)
Frame = +3
Query: 492 PSXXGLXPPPXX----PPPXIXXXFPXFPXPXXTXPPXPXXXTXGTXPPXXXXXXQXPPP 659
P+ G P P PP + P P P PP P P P P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Query: 660 PPXXXPHP 683
P P
Sbjct: 1175 SSGIPPVP 1182
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/50 (30%), Positives = 16/50 (32%), Gaps = 3/50 (6%)
Frame = +2
Query: 563 PXPPXNXPPQXXXXNXWXXPXPXXXXXXXP---PPPPXXXXSPPXPXXXA 703
P PP PPQ + P PPPP PP P A
Sbjct: 240 PPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPPTNA 289
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 199 LSFF--QDVSQLNTDDEYYKIGKDYDIEMNMDN 291
L+FF Q+V Q+N +DEY + + D E +DN
Sbjct: 49 LNFFSTQNVMQMNFEDEYSEFSNE-DDEAEIDN 80
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,262,579
Number of Sequences: 5004
Number of extensions: 39915
Number of successful extensions: 265
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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