Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_C23
(895 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70780-8|CAA94825.2| 266|Caenorhabditis elegans Hypothetical pr... 30 2.6
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 29 5.9
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 29 5.9
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 29 5.9
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 29 5.9
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 29 5.9
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 29 5.9
U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical pr... 28 7.8
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z70780-8|CAA94825.2| 266|Caenorhabditis elegans Hypothetical
protein F46B6.9 protein.
Length = 266
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -3
Query: 164 SQSAAISVRSELRASASTTAEWRRAMSRSGACQHVSTRAC 45
S+S+A S +SE+ +AST + R + G Q VST +C
Sbjct: 208 SKSSARSAKSEIGTTASTERKSPREGTSKGDYQKVSTNSC 247
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -1
Query: 631 SGCRASGPGXSEAMSCRCATTR*SPARWPRSTPQRSSDPQRLPASRRSARPVLKLPM 461
+GC SG C+ + R+PR+ P + +LP A+P K PM
Sbjct: 1427 TGCGKSGNNFLTKEECQTKCEK----RFPRAAPSKKKAKVKLPVGYSGAKPKDKTPM 1479
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -1
Query: 631 SGCRASGPGXSEAMSCRCATTR*SPARWPRSTPQRSSDPQRLPASRRSARPVLKLPM 461
+GC SG C+ + R+PR+ P + +LP A+P K PM
Sbjct: 1641 TGCGKSGNNFLTKEECQTKCEK----RFPRAAPSKKKAKVKLPVGYSGAKPKDKTPM 1693
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -1
Query: 631 SGCRASGPGXSEAMSCRCATTR*SPARWPRSTPQRSSDPQRLPASRRSARPVLKLPM 461
+GC SG C+ + R+PR+ P + +LP A+P K PM
Sbjct: 1777 TGCGKSGNNFLTKEECQTKCEK----RFPRAAPSKKKAKVKLPVGYSGAKPKDKTPM 1829
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -1
Query: 631 SGCRASGPGXSEAMSCRCATTR*SPARWPRSTPQRSSDPQRLPASRRSARPVLKLPM 461
+GC SG C+ + R+PR+ P + +LP A+P K PM
Sbjct: 1818 TGCGKSGNNFLTKEECQTKCEK----RFPRAAPSKKKAKVKLPVGYSGAKPKDKTPM 1870
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -1
Query: 631 SGCRASGPGXSEAMSCRCATTR*SPARWPRSTPQRSSDPQRLPASRRSARPVLKLPM 461
+GC SG C+ + R+PR+ P + +LP A+P K PM
Sbjct: 1829 TGCGKSGNNFLTKEECQTKCEK----RFPRAAPSKKKAKVKLPVGYSGAKPKDKTPM 1881
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -1
Query: 631 SGCRASGPGXSEAMSCRCATTR*SPARWPRSTPQRSSDPQRLPASRRSARPVLKLPM 461
+GC SG C+ + R+PR+ P + +LP A+P K PM
Sbjct: 1830 TGCGKSGNNFLTKEECQTKCEK----RFPRAAPSKKKAKVKLPVGYSGAKPKDKTPM 1882
>U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical
protein C10G11.6 protein.
Length = 425
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -2
Query: 423 VCAPTCSQPEPSYTLPLPPTRNEGPMSQYCKASMWLVWIFRTSSSQPASVLQKGV 259
+ +P +P PS ++PLPP + P S Y ++ + ++S+S S L K +
Sbjct: 172 IVSPDVRRPPPSLSIPLPP-MHIPPPSVYFISTPSIYSTAKSSTSTVTSKLSKAI 225
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 187 DGLIPGARVVPGAAREPRHRP 249
+G+ G VPG REP HRP
Sbjct: 210 NGITRGQTRVPGTTREPTHRP 230
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,029,505
Number of Sequences: 27780
Number of extensions: 321207
Number of successful extensions: 1038
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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