Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_C20
         (828 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624...    32   0.48 
03_02_0599 - 9730204-9730314,9730766-9731549,9731631-9732051,973...    31   1.1  
12_01_1025 - 10506144-10506226,10506643-10506699,10507502-105076...    30   2.6  
11_01_0110 + 850780-850805,851465-851537,851558-851720,851947-85...    28   7.9  
03_06_0690 - 35571816-35572586                                         28   7.9  

>03_02_0186 -
           6243487-6243799,6243892-6244400,6244495-6244557,
           6245482-6245681,6246125-6246519,6246776-6246888
          Length = 530

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 18/34 (52%), Positives = 19/34 (55%)
 Frame = +3

Query: 459 CLFCACASQSRSILVCLLHRCYPAP*LPRFRCSW 560
           CLFC     SR ILVC L RC  AP L R+   W
Sbjct: 58  CLFCEANFISRRILVCDLLRCLVAPSL-RYPNPW 90


>03_02_0599 -
           9730204-9730314,9730766-9731549,9731631-9732051,
           9732139-9732385,9733730-9733921,9734071-9734204,
           9734316-9734477,9736162-9736200,9737507-9737825
          Length = 802

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = -3

Query: 616 NFLQHFHIHKHFRVYFIRSQEQRNRGNQGAG*QRCRRHTRIDLD*DAHAQN 464
           +F+QH H H H+ V+ +  Q+Q+    +G+   +C      D   + HA N
Sbjct: 633 SFMQHHH-HVHYYVHVMTQQQQQPSIERGSSDAQCGSSNVFDPPIEGHAAN 682


>12_01_1025 -
           10506144-10506226,10506643-10506699,10507502-10507605,
           10507884-10507937,10508107-10508193,10509027-10509214,
           10509793-10509854,10510084-10510354,10510756-10510834,
           10511715-10511913,10512816-10512960,10513324-10513416,
           10514449-10514736
          Length = 569

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +1

Query: 442 ETFYKSACFARVHLNQGQFLYAF-YIAVIQRPDCHGF 549
           ETF+ +AC  R HL QG+ + A+ Y+   +  DC GF
Sbjct: 427 ETFFTTACMGRGHLCQGKLVDAYRYLHKEKDMDC-GF 462


>11_01_0110 + 850780-850805,851465-851537,851558-851720,851947-852260,
            852330-852409,852506-852848,853068-853166,853240-853360,
            853567-853723,853976-854099,855275-855368,855866-857259,
            857882-857924,858240-858458,859379-859605,859701-859948,
            860246-860552,860725-861153
          Length = 1486

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3

Query: 667  LSCGFRINEAMLHLCYVNFLQHFHIHKHFRVYFIR 563
            L  GFR++ A+ +LC + +L+   I K  R   IR
Sbjct: 1002 LKAGFRLSSALFYLCNILWLRAVKIRKKLRRQGIR 1036


>03_06_0690 - 35571816-35572586
          Length = 256

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 125 AERDGYKPSQNQDKTSWFPA 66
           A R G KP+Q + +T+W PA
Sbjct: 109 AHRRGQKPAQRRPRTAWIPA 128


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,242,493
Number of Sequences: 37544
Number of extensions: 355958
Number of successful extensions: 715
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)