Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_C20
         (828 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr...    29   5.4  
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p...    29   5.4  
U80848-1|AAB37990.3|  389|Caenorhabditis elegans Hypothetical pr...    29   5.4  
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.      29   5.4  
Z83731-4|CAB06021.2|  471|Caenorhabditis elegans Hypothetical pr...    28   9.4  
AM498742-1|CAM58448.1|  471|Caenorhabditis elegans MAP kinase pr...    28   9.4  
AF039050-3|AAC47936.2|  498|Caenorhabditis elegans Cytochrome p4...    28   9.4  

>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
            C35C5.1 protein.
          Length = 2962

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 153  KSKNVDAVFVEKQKKILSFFQDVSQLNTDDEY 248
            +SK+VDA    KQK ++   Q V  LN  +EY
Sbjct: 2277 RSKSVDAPKTSKQKTVIRRSQSVCDLNDVNEY 2308


>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
            protein C35C5.1 protein.
          Length = 2962

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 153  KSKNVDAVFVEKQKKILSFFQDVSQLNTDDEY 248
            +SK+VDA    KQK ++   Q V  LN  +EY
Sbjct: 2277 RSKSVDAPKTSKQKTVIRRSQSVCDLNDVNEY 2308


>U80848-1|AAB37990.3|  389|Caenorhabditis elegans Hypothetical
           protein T10H10.3 protein.
          Length = 389

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = -1

Query: 573 TSYGARNNETVAIRALDNSDVEGIQELTLIEMHTRKTGTLVERFKVLSVIE 421
           TS+GARNN  ++ R+ +   +  +   +L   H+   G + +  + LSVIE
Sbjct: 126 TSFGARNNYVLSSRSFNRGALRYVPRKSLTASHS--IGNVEQGTRELSVIE 174


>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
          Length = 2962

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 153  KSKNVDAVFVEKQKKILSFFQDVSQLNTDDEY 248
            +SK+VDA    KQK ++   Q V  LN  +EY
Sbjct: 2277 RSKSVDAPKTSKQKTVIRRSQSVCDLNDVNEY 2308


>Z83731-4|CAB06021.2|  471|Caenorhabditis elegans Hypothetical
           protein M04C9.5 protein.
          Length = 471

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 18/74 (24%), Positives = 27/74 (36%)
 Frame = +2

Query: 581 KMFMNMEVLQKIYVTKMQHGLINPEAAAKYGIHKENDYFVYKANYSNAXLYNNEXQRLTY 760
           K F + E    +   K    L +P       + +END   +   +    LY     R  Y
Sbjct: 44  KKFYSWEEAMSLREVKSLKKLNHPNIIKLREVIRENDILYFVFEFMQENLYELMKDRDRY 103

Query: 761 FTEDIGMNAXYYLL 802
           F E +  N  Y +L
Sbjct: 104 FPESVIRNIIYQVL 117


>AM498742-1|CAM58448.1|  471|Caenorhabditis elegans MAP kinase
           protein.
          Length = 471

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 18/74 (24%), Positives = 27/74 (36%)
 Frame = +2

Query: 581 KMFMNMEVLQKIYVTKMQHGLINPEAAAKYGIHKENDYFVYKANYSNAXLYNNEXQRLTY 760
           K F + E    +   K    L +P       + +END   +   +    LY     R  Y
Sbjct: 44  KKFYSWEEAMSLREVKSLKKLNHPNIIKLREVIRENDILYFVFEFMQENLYELMKDRDRY 103

Query: 761 FTEDIGMNAXYYLL 802
           F E +  N  Y +L
Sbjct: 104 FPESVIRNIIYQVL 117


>AF039050-3|AAC47936.2|  498|Caenorhabditis elegans Cytochrome p450
           family protein 34A6 protein.
          Length = 498

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +3

Query: 204 SFFQDVSQLNTDDEYYKIGKDYDIEMNMDNYTNKKAVEEF 323
           +F   +S ++TDDE +K  K+++ E  M+N   +K +  F
Sbjct: 397 AFATQLSAMHTDDETFKNHKEFNPERFMENNNLEKKLIPF 436


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,168,558
Number of Sequences: 27780
Number of extensions: 341448
Number of successful extensions: 816
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)