Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_C19
(1045 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 34 0.16
07_01_0080 + 587674-588510 33 0.50
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 32 0.87
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 31 1.5
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 2.0
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 31 2.0
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 29 4.6
03_02_0631 + 9969841-9969868,9969965-9970082,9970186-9970828,997... 29 4.6
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 6.1
08_02_1256 + 25645085-25645396 29 8.1
07_03_1136 + 24218601-24218734,24218769-24219906 29 8.1
01_01_0082 + 625198-625719 29 8.1
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 34.3 bits (75), Expect = 0.16
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 497 PXFXXPPPPKXXXGGXXFPPPPXXKKKKXXPPP 595
P PPPP G PPPP KK PPP
Sbjct: 348 PPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPP 380
Score = 32.7 bits (71), Expect = 0.50
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +2
Query: 512 PPPPKXXXGGXXFPPPPXXKKKKXXPPPXXXXXXXXXXKXPXXP 643
PPPP PPPP K PPP K P P
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPP 356
Score = 31.5 bits (68), Expect = 1.1
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 497 PXFXXPPPPKXXXGGXXFPPPPXXKKKKXXPPP 595
P PPPP PPPP KK PPP
Sbjct: 349 PAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPP 381
Score = 29.1 bits (62), Expect = 6.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 497 PXFXXPPPPKXXXGGXXFPPPPXXKKKKXXPP 592
P PPPP G PPPP K PP
Sbjct: 359 PKGPSPPPPPPPGGKKGGPPPPPPKGGASRPP 390
>07_01_0080 + 587674-588510
Length = 278
Score = 32.7 bits (71), Expect = 0.50
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 482 KXGGAPXFXXPPPPKXXXGGXXFPPPPXXKKKKXXPPP 595
+ GG F PPPP PPPP PPP
Sbjct: 81 RLGGDGMFRRPPPPPPPPPSSGSPPPPPPPPPPPPPPP 118
Score = 30.3 bits (65), Expect = 2.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 512 PPPPKXXXGGXXFPPPPXXKKKKXXPPP 595
PPPP G PPPP PPP
Sbjct: 93 PPPPPPPSSGSPPPPPPPPPPPPPPPPP 120
Score = 30.3 bits (65), Expect = 2.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 512 PPPPKXXXGGXXFPPPPXXKKKKXXPPP 595
PPPP G PPPP PPP
Sbjct: 94 PPPPPPSSGSPPPPPPPPPPPPPPPPPP 121
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 31.9 bits (69), Expect = 0.87
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 491 GAPXFXXPPPPKXXXGGXXFPPPPXXKKKKXXPPP 595
GAP PPPP PPPP PPP
Sbjct: 218 GAPPPPPPPPPSPHRHPAAHPPPPPHHPAPRPPPP 252
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +2
Query: 512 PPPPKXXXGGXXFPPPPXXK-KKKXXPPP 595
PPPPK G PPPP K PPP
Sbjct: 601 PPPPKSTGPGPPRPPPPAMPGSSKTRPPP 629
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +2
Query: 488 GGAPXFXXPPPPKXXXGGXXFPPPPXXKKKKXXPP 592
GG P PPPP GG PPPP + PP
Sbjct: 1146 GGVP----PPPPVGGLGGPPAPPPPAGFRGGTPPP 1176
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 512 PPPPKXXXGGXXFPPPPXXKKKKXXPPP 595
PPPP G PPPP PPP
Sbjct: 1099 PPPPSIGAGAPPPPPPPGGITGVPPPPP 1126
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 512 PPPPKXXXGGXXFPPPPXXKKKKXXPPP 595
PPPP PPPP KK PPP
Sbjct: 360 PPPPPPPPPPPPRPPPPPPPIKKGAPPP 387
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 29.5 bits (63), Expect = 4.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 512 PPPPKXXXGGXXFPPPPXXKKKKXXPPP 595
PPPP G PPPP PPP
Sbjct: 614 PPPPPRPPGAPPPPPPPGKPGGPPPPPP 641
>03_02_0631 +
9969841-9969868,9969965-9970082,9970186-9970828,
9971146-9971935,9972002-9972051,9972618-9972704
Length = 571
Score = 29.5 bits (63), Expect = 4.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 515 PPPKXXXGGXXFPPPPXXKKKKXXPPP 595
PPP PPPP K K PPP
Sbjct: 91 PPPAQKPSKVSPPPPPPQKSAKVSPPP 117
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.1 bits (62), Expect = 6.1
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 491 GAPXFXXPPPPKXXXGGXXFPPPPXXKKKKXXPPP 595
G P PPPP PPPP PPP
Sbjct: 75 GPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPP 109
>08_02_1256 + 25645085-25645396
Length = 103
Score = 28.7 bits (61), Expect = 8.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 512 PPPPKXXXGGXXFPPPPXXKKKKXXPPP 595
PPPP PPPP ++++ PPP
Sbjct: 62 PPPPPPPPLPSPPPPPPPQQQEEQSPPP 89
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 28.7 bits (61), Expect = 8.1
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 594 GGGXXFFFXXXGGGGKXXPPXXXXGGGG 511
GGG GGGG PP GGGG
Sbjct: 114 GGGPPSLPPGAGGGGGARPPAPGGGGGG 141
>01_01_0082 + 625198-625719
Length = 173
Score = 28.7 bits (61), Expect = 8.1
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +2
Query: 503 FXXPPPPKXXXGGXXFPPPPXXKKKKXXPPP 595
+ PPPP +PPPP PPP
Sbjct: 50 YASPPPPDVLPTPVYYPPPPPVYYPPPSPPP 80
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,090,194
Number of Sequences: 37544
Number of extensions: 326867
Number of successful extensions: 1476
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3082779744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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