Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_C18
(886 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46934-11|CAE18043.1| 497|Caenorhabditis elegans Hypothetical p... 30 1.9
Z46934-10|CAD18882.1| 495|Caenorhabditis elegans Hypothetical p... 30 1.9
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 30 2.5
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 30 2.5
U28991-2|AAK68307.1| 679|Caenorhabditis elegans Kinesin-associa... 29 4.4
AB017107-1|BAA88838.1| 679|Caenorhabditis elegans Kinesin assoc... 29 4.4
Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical pr... 29 5.8
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 28 7.7
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 28 7.7
>Z46934-11|CAE18043.1| 497|Caenorhabditis elegans Hypothetical
protein ZK1320.12b protein.
Length = 497
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 203 DYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKMNCM 313
D D + EK + +KK IT++VN +IRN C+
Sbjct: 205 DIDFSYEKVREAMSQKKRNGITSLVNYMIRNYPSICL 241
>Z46934-10|CAD18882.1| 495|Caenorhabditis elegans Hypothetical
protein ZK1320.12a protein.
Length = 495
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 203 DYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKMNCM 313
D D + EK + +KK IT++VN +IRN C+
Sbjct: 205 DIDFSYEKVREAMSQKKRNGITSLVNYMIRNYPSICL 241
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 106 NYSGLHLWSVESCVLPKNGTQIL 38
NY+ LH W +ES + P N T +L
Sbjct: 60 NYNNLHYWLIESQLTPSNDTLLL 82
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 106 NYSGLHLWSVESCVLPKNGTQIL 38
NY+ LH W +ES + P N T +L
Sbjct: 60 NYNNLHYWLIESQLTPSNDTLLL 82
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 106 NYSGLHLWSVESCVLPKNGTQIL 38
NY+ LH W +ES + P N T +L
Sbjct: 60 NYNNLHYWLIESQLTPSNDTLLL 82
>U28991-2|AAK68307.1| 679|Caenorhabditis elegans Kinesin-associated
protein protein1, isoform b protein.
Length = 679
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +2
Query: 245 EKKSEVITNVVNKLIRNNKMNCMEY---AYQLWLQGLQGTSSGIVSQLSSDLSSPKTRLS 415
+K EV TN++N I +N ME+ Y W+ ++ T + +L + + L+
Sbjct: 166 KKHFEVGTNIMNLFIGTLCVNAMEHETKRYDFWIAEMKKTDQETLRKLKTAIRKQAMLLA 225
Query: 416 LCTSATVSL 442
C + +L
Sbjct: 226 ACVTFLTNL 234
>AB017107-1|BAA88838.1| 679|Caenorhabditis elegans Kinesin
associated protein kap-1 protein.
Length = 679
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +2
Query: 245 EKKSEVITNVVNKLIRNNKMNCMEY---AYQLWLQGLQGTSSGIVSQLSSDLSSPKTRLS 415
+K EV TN++N I +N ME+ Y W+ ++ T + +L + + L+
Sbjct: 166 KKHFEVGTNIMNLFIGTLCVNAMEHETKRYDFWIAEMKKTDQETLRKLKTAIRKQAMLLA 225
Query: 416 LCTSATVSL 442
C + +L
Sbjct: 226 ACVTFLTNL 234
>Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical
protein R09E10.9 protein.
Length = 443
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -2
Query: 666 LSTLLTPKAIWSPFQLVPTPQYQVLVTFSVQDLEVDLVXLPQSD*LPADS 517
+ST P I SP ++VP P + L+T +V + V P LP+ S
Sbjct: 343 VSTPPVPSTIPSPSKVVPNPPQKSLITPTVPPSMIQTVNPPTVSALPSPS 392
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 28.3 bits (60), Expect = 7.7
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Frame = +2
Query: 83 PKMKPAIVILCLFVASLYAADSD-VPNDILEEQLY--NSVVVADYDSAVEKSKH-LYEEK 250
P +K +V LC+ +LY + S + + EQLY +SV A + ++ + + EE
Sbjct: 922 PTVKNVVVDLCMTAQTLYISPSTRETREKILEQLYEWHSVCTAQMRISGKRFQMVMNEEI 981
Query: 251 KSEVITNVVNKLIRNNKMNCMEYAYQLWLQGLQGTSSGIVSQLSSDLS 394
+ E N++N + C+E AY + G S + LS LS
Sbjct: 982 EPETYHNILN--VMPEGQACLEKAYDC----VNGIMSDLEEYLSEWLS 1023
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 28.3 bits (60), Expect = 7.7
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Frame = +2
Query: 83 PKMKPAIVILCLFVASLYAADSD-VPNDILEEQLY--NSVVVADYDSAVEKSKH-LYEEK 250
P +K +V LC+ +LY + S + + EQLY +SV A + ++ + + EE
Sbjct: 922 PTVKNVVVDLCMTAQTLYISPSTRETREKILEQLYEWHSVCTAQMRISGKRFQMVMNEEI 981
Query: 251 KSEVITNVVNKLIRNNKMNCMEYAYQLWLQGLQGTSSGIVSQLSSDLS 394
+ E N++N + C+E AY + G S + LS LS
Sbjct: 982 EPETYHNILN--VMPEGQACLEKAYDC----VNGIMSDLEEYLSEWLS 1023
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,382,938
Number of Sequences: 27780
Number of extensions: 305084
Number of successful extensions: 1018
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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