Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_C17
         (892 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024817-53|AAP13744.1|  549|Caenorhabditis elegans Hypothetical...    35   0.068
AC024817-52|AAF59568.4|  611|Caenorhabditis elegans Hypothetical...    35   0.068
AF022981-4|AAG24205.1|  602|Caenorhabditis elegans Hypothetical ...    34   0.12 
AY081955-1|AAL92523.1|  788|Caenorhabditis elegans MAT-1 protein.      34   0.16 
AC006708-13|AAF60415.1|  788|Caenorhabditis elegans Metaphase-to...    34   0.16 
Z29443-8|CAE45742.1|  455|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z29443-7|CAA82571.2|  497|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z70307-11|CAA94337.1|  488|Caenorhabditis elegans Hypothetical p...    30   1.9  
Z81527-6|CAB04275.1|  739|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z78415-7|CAH60759.1|  844|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z78415-5|CAB01670.1|  925|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z49132-3|CAA88988.1|  397|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z92782-2|CAB07188.1|  331|Caenorhabditis elegans Hypothetical pr...    29   5.9  
AL032634-3|CAE45092.1|  412|Caenorhabditis elegans Hypothetical ...    29   5.9  
Z72504-5|CAA96602.2|  812|Caenorhabditis elegans Hypothetical pr...    28   7.8  
U21319-5|AAL02454.1| 1100|Caenorhabditis elegans Hypothetical pr...    28   7.8  
U21319-4|AAL02455.1| 1097|Caenorhabditis elegans Hypothetical pr...    28   7.8  
AF016660-2|AAB66048.2|  811|Caenorhabditis elegans Hypothetical ...    28   7.8  
AC024790-5|AAF60640.2|  119|Caenorhabditis elegans Hypothetical ...    28   7.8  

>AC024817-53|AAP13744.1|  549|Caenorhabditis elegans Hypothetical
           protein Y54G2A.26b protein.
          Length = 549

 Score = 35.1 bits (77), Expect = 0.068
 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
 Frame = +2

Query: 548 SKPVYGPPKKIPYNHYQPEVA----GFGEPPIQNSYDYNTHKKTYGEPPVDSYGAP 703
           S P Y PP    ++H QP+      G      Q  Y YNT     G PP  SYG P
Sbjct: 33  SNPYYQPPVPPQHHHMQPQAPMMSPGMHGQQQQQPY-YNTQSPLTGTPPSMSYGTP 87


>AC024817-52|AAF59568.4|  611|Caenorhabditis elegans Hypothetical
           protein Y54G2A.26a protein.
          Length = 611

 Score = 35.1 bits (77), Expect = 0.068
 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
 Frame = +2

Query: 548 SKPVYGPPKKIPYNHYQPEVA----GFGEPPIQNSYDYNTHKKTYGEPPVDSYGAP 703
           S P Y PP    ++H QP+      G      Q  Y YNT     G PP  SYG P
Sbjct: 95  SNPYYQPPVPPQHHHMQPQAPMMSPGMHGQQQQQPY-YNTQSPLTGTPPSMSYGTP 149


>AF022981-4|AAG24205.1|  602|Caenorhabditis elegans Hypothetical
           protein W03F9.10 protein.
          Length = 602

 Score = 34.3 bits (75), Expect = 0.12
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +2

Query: 560 YGPPKKIPYNHYQPEVAGFGEPPIQNSYDYNTHKKTYGEPPVDSYGAPI 706
           YGPP   P+     ++ G   P I     +  H   +G+PPVD YG P+
Sbjct: 337 YGPPPSFPHI----KIPGLNAP-IPEGCAFGYHAGGWGKPPVDEYGHPL 380


>AY081955-1|AAL92523.1|  788|Caenorhabditis elegans MAT-1 protein.
          Length = 788

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 43/144 (29%), Positives = 63/144 (43%), Gaps = 5/144 (3%)
 Frame = +3

Query: 249 NQAKRKESGNETPRCS---STTSRWILVTRIRKSSTDAYQKYRGNATDRPNQNMGRPDLF 419
           N+  R  + N TPR S   ST SR I  T  RKSS  +    R   +        R  LF
Sbjct: 248 NRETRNTTSNITPRQSTPGSTPSR-INPTAPRKSSRISEMTTRRTESSVTGS---RSSLF 303

Query: 420 TDPRNPGNRVRSTMEKLTRDTALLVTKNGHRNQSRDTVPRNVRASLS--TDHQRRSRITT 593
           T+P  P    R+T     R  A L +   + N S +T  R+  AS++  +   +R+    
Sbjct: 304 TEPERP--HTRATHSSRNRANAALNSDTENSNAS-NTRTRSGIASVTRGSSSSQRTNPVR 360

Query: 594 TNQKWLDLANRPFKTPMTITPTKR 665
           T+ +  D A    KT  T++  +R
Sbjct: 361 TSIRIADAAAAANKTAKTLSQRRR 384


>AC006708-13|AAF60415.1|  788|Caenorhabditis elegans
           Metaphase-to-anaphase transitiondefect protein 1,
           isoform a protein.
          Length = 788

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 43/144 (29%), Positives = 63/144 (43%), Gaps = 5/144 (3%)
 Frame = +3

Query: 249 NQAKRKESGNETPRCS---STTSRWILVTRIRKSSTDAYQKYRGNATDRPNQNMGRPDLF 419
           N+  R  + N TPR S   ST SR I  T  RKSS  +    R   +        R  LF
Sbjct: 248 NRETRNTTSNITPRQSTPGSTPSR-INPTAPRKSSRISEMTTRRTESSVTGS---RSSLF 303

Query: 420 TDPRNPGNRVRSTMEKLTRDTALLVTKNGHRNQSRDTVPRNVRASLS--TDHQRRSRITT 593
           T+P  P    R+T     R  A L +   + N S +T  R+  AS++  +   +R+    
Sbjct: 304 TEPERP--HTRATHSSRNRANAALNSDTENSNAS-NTRTRSGIASVTRGSSSSQRTNPVR 360

Query: 594 TNQKWLDLANRPFKTPMTITPTKR 665
           T+ +  D A    KT  T++  +R
Sbjct: 361 TSIRIADAAAAANKTAKTLSQRRR 384


>Z29443-8|CAE45742.1|  455|Caenorhabditis elegans Hypothetical
           protein T07C4.9b protein.
          Length = 455

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +2

Query: 584 YNHYQPEVAGFGEPPIQNSYDYNTHKKTYGEPPVDSY 694
           Y + QP   G+G+PP Q  Y  N     YG+P    Y
Sbjct: 7   YPNQQPSYGGYGQPPQQPGYG-NGSYDPYGQPQQQPY 42


>Z29443-7|CAA82571.2|  497|Caenorhabditis elegans Hypothetical
           protein T07C4.9a protein.
          Length = 497

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +2

Query: 584 YNHYQPEVAGFGEPPIQNSYDYNTHKKTYGEPPVDSY 694
           Y + QP   G+G+PP Q  Y  N     YG+P    Y
Sbjct: 49  YPNQQPSYGGYGQPPQQPGYG-NGSYDPYGQPQQQPY 84


>Z70307-11|CAA94337.1|  488|Caenorhabditis elegans Hypothetical
           protein C39E9.10 protein.
          Length = 488

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = -1

Query: 685 DRRLTVSLFVGVIVIGVLNGRFAKSSHFWLVVVIRDLL 572
           +R+  + + VG+ +  VL   F  ++HFWL +V+R  +
Sbjct: 72  NRKWIMIIGVGIWLGAVLGSSFVPANHFWLFLVLRSFV 109


>Z81527-6|CAB04275.1|  739|Caenorhabditis elegans Hypothetical
           protein F35E12.7a protein.
          Length = 739

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 22/84 (26%), Positives = 37/84 (44%)
 Frame = +3

Query: 447 VRSTMEKLTRDTALLVTKNGHRNQSRDTVPRNVRASLSTDHQRRSRITTTNQKWLDLANR 626
           V +    +T  + +   K+     S+ T   NV +S +T   R  + TTT QK    ++ 
Sbjct: 511 VSTVTSTITSQSIVTTNKSSSPITSKTTTSINVSSS-TTKSTRPMQSTTTYQKLAQASST 569

Query: 627 PFKTPMTITPTKRLTVSLRSIPTE 698
              TP+ IT     T S+ +  T+
Sbjct: 570 ASTTPIPITTQNISTASIATPSTK 593


>Z78415-7|CAH60759.1|  844|Caenorhabditis elegans Hypothetical
           protein C17G1.4b protein.
          Length = 844

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 566 PPKKIPYNHYQPEVAGFGEPPIQNS 640
           PP+  P  HYQP     G PP++ +
Sbjct: 204 PPQNAPLQHYQPPQYANGTPPVRGA 228


>Z78415-5|CAB01670.1|  925|Caenorhabditis elegans Hypothetical
           protein C17G1.4a protein.
          Length = 925

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 566 PPKKIPYNHYQPEVAGFGEPPIQNS 640
           PP+  P  HYQP     G PP++ +
Sbjct: 204 PPQNAPLQHYQPPQYANGTPPVRGA 228


>Z49132-3|CAA88988.1|  397|Caenorhabditis elegans Hypothetical
           protein ZK666.3 protein.
          Length = 397

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 264 KESGNETPRCSSTTSRWILVTRIRKSSTDAYQKY 365
           K +G  T    S TS W+ V +++ SST+ Y  Y
Sbjct: 360 KANGILTNWVGSATSEWLFVCQVQSSSTEHYTTY 393


>Z92782-2|CAB07188.1|  331|Caenorhabditis elegans Hypothetical
           protein F14F8.3 protein.
          Length = 331

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -3

Query: 449 YPVSWISGVRKQ-VWAAHILVWAVRSVASIFLIC 351
           Y   +ISG +   +WA  ++ WA  SV   F+IC
Sbjct: 232 YQTLFISGSKSSHIWALGLVFWADFSVIHFFIIC 265


>AL032634-3|CAE45092.1|  412|Caenorhabditis elegans Hypothetical
           protein Y39G8C.4 protein.
          Length = 412

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +2

Query: 551 KPVYGPPKKIPYNHYQPEVAGFGEPPIQNSYDYNTHKKT 667
           K  Y P   +P + YQP    +  PP + S +Y T + T
Sbjct: 290 KKPYPPAPTMPPDAYQPTTEAYYYPPTETSTEYVTAEPT 328


>Z72504-5|CAA96602.2|  812|Caenorhabditis elegans Hypothetical
           protein C29E6.1a protein.
          Length = 812

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
 Frame = +3

Query: 420 TDPRNPGNRVRSTMEKLTRDTALLVTKNGHRNQSRDTVPRNVRASLSTDHQRRSRI---T 590
           T  R P N  RST+   T   A++V K+    ++R           +T H    +I   T
Sbjct: 447 TTTRKPANPRRSTIMSATSKVAIIVGKDSSFARAR---------LFTTKHPSTQKIDVPT 497

Query: 591 TTNQKWLDLANRPFKTPMTITPTKRLTVS 677
           TT Q    +   P KT  T T T + T +
Sbjct: 498 TTVQTSTTVPTTPSKTTATTTTTPKPTTT 526


>U21319-5|AAL02454.1| 1100|Caenorhabditis elegans Hypothetical
           protein C30G12.6a protein.
          Length = 1100

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +2

Query: 614 FGEPPIQNSYDYNTHKKTYGEPPVDSYGAPIKASLKDIYPATSGXKRXN 760
           F EP  ++S+D         EP  DS+  PI++S+       +G    N
Sbjct: 24  FEEPACEDSFDSQEASSKANEPQNDSFDEPIQSSVSKQSDDANGEDEIN 72


>U21319-4|AAL02455.1| 1097|Caenorhabditis elegans Hypothetical
           protein C30G12.6b protein.
          Length = 1097

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +2

Query: 614 FGEPPIQNSYDYNTHKKTYGEPPVDSYGAPIKASLKDIYPATSGXKRXN 760
           F EP  ++S+D         EP  DS+  PI++S+       +G    N
Sbjct: 24  FEEPACEDSFDSQEASSKANEPQNDSFDEPIQSSVSKQSDDANGEDEIN 72


>AF016660-2|AAB66048.2|  811|Caenorhabditis elegans Hypothetical
           protein F53A10.2c protein.
          Length = 811

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +2

Query: 557 VYGPPKKIPYNHYQPEVAGFGEPPIQNSYDYNTHKKTYG 673
           V GPP  I       E++GF   P     +  TH+KT G
Sbjct: 154 VVGPPTLISSTVSLHEISGFTHNPTSGHQNEQTHQKTNG 192


>AC024790-5|AAF60640.2|  119|Caenorhabditis elegans Hypothetical
           protein Y47D7A.2 protein.
          Length = 119

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +2

Query: 554 PVYGPPKKIPYNHYQPEVAGFGEPPIQNSYDYNTHKK 664
           P Y  PKK P     P    +  PP Q++Y  + +++
Sbjct: 37  PSYPTPKKYPVAPTYPSTPSYSAPPAQSAYSSSDNQE 73


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,027,344
Number of Sequences: 27780
Number of extensions: 369666
Number of successful extensions: 1169
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)