Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_C03
(885 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0347 - 29440541-29440664,29440908-29441020,29441522-294416... 100 2e-21
07_03_0445 - 18281715-18281832,18282274-18282505,18283486-182835... 99 5e-21
12_02_0695 + 22220054-22220056,22221226-22221276,22221415-222215... 96 3e-20
10_08_0945 - 21738643-21738760,21740056-21740287,21740582-217406... 88 8e-18
11_01_0681 - 5568312-5568328,5569057-5569213,5569321-5569482,556... 29 5.0
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531... 29 5.0
10_08_1046 + 22542074-22544749,22544837-22545544 28 8.7
>05_07_0347 -
29440541-29440664,29440908-29441020,29441522-29441689,
29442341-29442391,29442518-29442555,29442885-29442978
Length = 195
Score = 100 bits (239), Expect = 2e-21
Identities = 54/121 (44%), Positives = 69/121 (57%)
Frame = +2
Query: 119 AEQRERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPF 298
A + ERTFI +KPDGVQRGL+ I+ RFE+KGFKLV +K V PS+E Q+HY DL RPF
Sbjct: 42 AAEMERTFIAIKPDGVQRGLISEILSRFERKGFKLVAIKLVVPSKEFAQKHYHDLKDRPF 101
Query: 299 FPGSXKVHEFRTXXXXXXXXXXXXERLAVKCLGATKPTESQXGHYPAVISGIPXGRNIIH 478
F G + K +GAT P +S+ G ++ + GRNIIH
Sbjct: 102 FNGLCDFLSSGPVLAMVWEGEGVI-KYGRKLIGATDPQKSEPGTIRGDLA-VVVGRNIIH 159
Query: 479 G 481
G
Sbjct: 160 G 160
Score = 45.2 bits (102), Expect = 7e-05
Identities = 28/73 (38%), Positives = 35/73 (47%)
Frame = +3
Query: 306 GLXKYMSSGPVVPMVWEGPNVVKDWPSNAWAPLNQLNXXPGTIPR*SLAFXLGVTXXXXX 485
GL ++SSGPV+ MVWEG V+K + + PGTI R LA +G
Sbjct: 104 GLCDFLSSGPVLAMVWEGEGVIK-YGRKLIGATDPQKSEPGTI-RGDLAVVVGRNIIHGS 161
Query: 486 XXXXXAKXEISLW 524
AK EI LW
Sbjct: 162 DGPETAKAEIGLW 174
>07_03_0445 -
18281715-18281832,18282274-18282505,18283486-18283534,
18283733-18283783
Length = 149
Score = 98.7 bits (235), Expect = 5e-21
Identities = 53/119 (44%), Positives = 73/119 (61%), Gaps = 2/119 (1%)
Frame = +2
Query: 131 ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGS 310
E++FIM+KPDGVQRGL+G II RFEKKGF L G+KF+ QQHY+DL+ +PFFPG
Sbjct: 2 EQSFIMIKPDGVQRGLIGDIISRFEKKGFYLRGMKFMNVERSFAQQHYADLSDKPFFPG- 60
Query: 311 XKVHEFRTXXXXXXXXXXXXERLAV--KCLGATKPTESQXGHYPAVISGIPXGRNIIHG 481
+ E+ + +A + +GAT+P E+ G A + + GRN+IHG
Sbjct: 61 --LVEYIISGPVVAMVWEGKDVVATGRRIIGATRPWEAAPGTIRADYA-VEVGRNVIHG 116
>12_02_0695 +
22220054-22220056,22221226-22221276,22221415-22221501,
22222064-22222144,22222241-22222353,22222482-22222531,
22222790-22222857
Length = 150
Score = 96.3 bits (229), Expect = 3e-20
Identities = 52/119 (43%), Positives = 72/119 (60%), Gaps = 2/119 (1%)
Frame = +2
Query: 131 ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGS 310
E+++IM+KPDGVQRGLVG II RFEKKGF L GLK ++L Q+HY DL +PFFPG
Sbjct: 3 EQSYIMIKPDGVQRGLVGEIISRFEKKGFVLKGLKLFQCPKDLAQEHYKDLKEKPFFPG- 61
Query: 311 XKVHEFRTXXXXXXXXXXXXERLAV--KCLGATKPTESQXGHYPAVISGIPXGRNIIHG 481
+ E+ T +A K +GAT P +++ G ++ + GRN++HG
Sbjct: 62 --LIEYITSGPVVCMAWEGNGVVASARKLIGATNPLQAEPGTIRGDLA-VQTGRNVVHG 117
>10_08_0945 -
21738643-21738760,21740056-21740287,21740582-21740630,
21740720-21740776
Length = 151
Score = 88.2 bits (209), Expect = 8e-18
Identities = 47/119 (39%), Positives = 70/119 (58%), Gaps = 2/119 (1%)
Frame = +2
Query: 131 ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGS 310
E+TFIM+KPDGVQRGL+G +I RFEKKGF L +K + + ++HY+DL+S+PFF G
Sbjct: 4 EQTFIMIKPDGVQRGLIGEVIGRFEKKGFYLKAMKLINVEKSFAEKHYADLSSKPFFGG- 62
Query: 311 XKVHEFRTXXXXXXXXXXXXERLAV--KCLGATKPTESQXGHYPAVISGIPXGRNIIHG 481
+ E+ + ++ K +GAT P ++ G + + GRN+IHG
Sbjct: 63 --LVEYIVSGPVVAMVWEGKQVVSTGRKLVGATNPLAAEPGTIRGDFA-VDIGRNVIHG 118
>11_01_0681 -
5568312-5568328,5569057-5569213,5569321-5569482,
5569524-5570546
Length = 452
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 189 LLNVSKRKASN*SV*NSYGHQKNFSSNT-TAIWXPGLSSLGLXKYMSSGPV 338
L + + RK S+ S+ + NFS T I+ P L SLGL YM+ PV
Sbjct: 245 LSDSNARKISSLSIKHLNISGCNFSDTFHTHIYAPNLLSLGLVNYMNQSPV 295
>06_03_0999 -
26752410-26752523,26752601-26752830,26752914-26753169,
26753763-26753828,26753921-26754046,26754148-26754288,
26754377-26754387,26754523-26754670,26755326-26755454,
26755573-26755710,26755808-26755876,26755955-26756023,
26756565-26756720,26756885-26756985,26757068-26757215,
26757540-26757702,26757833-26757965,26758049-26758226,
26758330-26758572,26758664-26758732,26759063-26759187,
26759727-26759766,26760756-26760812,26762831-26762935
Length = 1004
Score = 29.1 bits (62), Expect = 5.0
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = +2
Query: 113 MMAEQRERTFIMVKPDGVQRGLV-GTIIERFEKKGFKLVGLKFVWPSEELLQQHYSD--L 283
M E ER ++KP+ R L G+ ++F +KL+G+K +PS+++ + SD L
Sbjct: 628 MDQELAERQLDVIKPNLQSRMLKEGSEYDQF----WKLLGVKSEYPSQKIAKDQESDPHL 683
Query: 284 ASRPFFPGSXKVHE 325
S F G KV E
Sbjct: 684 FSCTFSKGVLKVRE 697
>10_08_1046 + 22542074-22544749,22544837-22545544
Length = 1127
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +2
Query: 131 ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGS 310
ER +VK +G G FE KG G +WP ++ + H +L S+P+ P +
Sbjct: 195 ERRLSLVKQNGGAPGEFDHNRWLFETKGTYGYG-NAIWPEDDGVAGHPKELMSKPWRPLT 253
Query: 311 XKV 319
K+
Sbjct: 254 RKL 256
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,930,847
Number of Sequences: 37544
Number of extensions: 287926
Number of successful extensions: 616
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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