Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_C02
(856 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 35 0.085
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 35 0.085
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 35 0.085
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 32 0.60
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 32 0.60
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 32 0.60
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 32 0.60
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 30 1.8
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 29 3.2
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 3.2
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 29 4.2
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 4.2
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 5.6
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 5.6
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 5.6
Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 28 7.4
AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAue... 28 7.4
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 28 7.4
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 9.7
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 28 9.7
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 28 9.7
U40029-3|AAA81124.1| 269|Caenorhabditis elegans Hypothetical pr... 28 9.7
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 28 9.7
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 34.7 bits (76), Expect = 0.085
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +1
Query: 139 WPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSL 297
WP ET TT T+ +P TTT+ T T +T T T A T+++
Sbjct: 298 WPLPAETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTTM 350
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 34.7 bits (76), Expect = 0.085
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +1
Query: 139 WPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSL 297
WP ET TT T+ +P TTT+ T T +T T T A T+++
Sbjct: 298 WPLPAETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTTM 350
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 34.7 bits (76), Expect = 0.085
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +1
Query: 127 LCWLWPTLKETATNLLTTARTSLILPKTTT---LMETATNLSTTVHITWTLPKADLTSSL 297
LC+LW L T T TT T+ + TTT + T T T T T+P T+++
Sbjct: 179 LCYLWVPLTTTTTTTTTTTTTTSPMNTTTTTVLINGTTTTTVPTNETTTTVPLNGTTTTV 238
Query: 298 P 300
P
Sbjct: 239 P 239
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -2
Query: 834 GXGGXXGGGGXGKGXPXRXXPAXFPGGXGGXHXXXGKTXXTXSPGN 697
G GG GGGG G P PGG G GK +PGN
Sbjct: 86 GAGGGGGGGGGGCDGCCNPGPPG-PGGSPGKPGKPGKPGAPGAPGN 130
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -2
Query: 834 GXGGXXGGGGXGKGXPXRXXPAXFPGGXGGXHXXXGKTXXTXSPGN 697
G GG GGGG G P PGG G GK +PGN
Sbjct: 86 GAGGGGGGGGGGCDGCCNPGPPG-PGGSPGKPGKPGKPGAPGAPGN 130
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -2
Query: 834 GXGGXXGGGGXGKGXPXRXXPAXFPGGXGGXHXXXGKTXXTXSPGN 697
G GG GGGG G P PGG G GK +PGN
Sbjct: 86 GAGGGGGGGGGGCDGCCNPGPPG-PGGSPGKPGKPGKPGAPGAPGN 130
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -2
Query: 834 GXGGXXGGGGXGKGXPXRXXPAXFPGGXGGXHXXXGKTXXTXSPGN 697
G GG GGGG G P PGG G GK +PGN
Sbjct: 86 GAGGGGGGGGGGCDGCCNPGPPG-PGGSPGKPGKPGKPGAPGAPGN 130
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +1
Query: 145 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLP 273
T T T TT+ T+ P TTT T STT T T P
Sbjct: 60 TTTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTP 102
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = -2
Query: 852 GXXXGXGXGGXX--GGGGXGKGXPXRXXPAXFPGGXGGXH 739
G G G GG GGGG G G + GG GG H
Sbjct: 175 GHHGGGGGGGSHHHGGGGGGGGHHHHGGGGHYHGGGGGFH 214
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 145 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTS-SLPLSLV 312
T T T TT T+ P TTT T T +TT T T P T+ S PL+ V
Sbjct: 90 TTTTTPTTTTTTPTTTTTTPTTTTTTPTTT--TTTPTTTTTTPTTTTTTRSTPLTEV 144
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = -2
Query: 852 GXXXGXGXGGXXGGGGXGKGXPXRXXPAXFPGGXGGXHXXXGK 724
G G G GG GGGG G+G GG GG G+
Sbjct: 93 GRGGGGGGGGGRGGGGGGRGGGGGGGGGR--GGGGGGRGGGGR 133
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -2
Query: 852 GXXXGXGXGGXXGGGGXGKGXPXRXXPAXFPGGXGG 745
G G GG GGGG G+G R P G G
Sbjct: 118 GGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSNG 153
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +1
Query: 157 TATNLLTTARTSLILPKTTTLMETATNLSTTVHIT--WTLPKADLTSSLP 300
T T TT T+ P TTT T T +TT+ T T P T++ P
Sbjct: 304 TETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTTPTTTATTTKP 353
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +1
Query: 157 TATNLLTTARTSLILPKTTTLMETATNL-STTVHITWTLPKADLTSS 294
T T TT TS P TTT T T STT T T+ T++
Sbjct: 297 TTTESTTTETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTT 343
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +1
Query: 145 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSL 297
T ++ T+ TT ++ +P TTT E AT T T LPK L L
Sbjct: 118 TTQKPTTSTTTTTTSTTPVPTTTTTTEAATTTVLTT-TTEELPKQQLAGRL 167
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +1
Query: 151 KETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSLPLSLVLAVGSK 330
KET T+L T PKTTT++ ++T ST +T +A T++ P + V +K
Sbjct: 442 KETTTSLATEQ------PKTTTIVASSTETST---VTTDATEATTTTTAPTTTVATTTTK 492
Query: 331 E 333
+
Sbjct: 493 K 493
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -2
Query: 852 GXXXGXGXGGXXGGGGXGKGXPXRXXPAXFPGGXGG 745
G G G GG GG G G G R P P G GG
Sbjct: 190 GGGGGMGGGGGSGGSGGGSG---RFPPPPPPYGGGG 222
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -2
Query: 852 GXXXGXGXGGXXGGGGXGKGXPXRXXPAXFPGGXGG 745
G G G GG GGGG G G A P G GG
Sbjct: 156 GGGGGGGCGGG-GGGGCGGGSSGGGGYAVAPSGGGG 190
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -2
Query: 852 GXXXGXGXGGXXGGGGXGKGXPXRXXPAXFPGGXGG 745
G G G GG GGGG G G A P G GG
Sbjct: 156 GGGGGGGCGGG-GGGGCGGGSSGGGGYAVAPSGGGG 190
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2
Query: 834 GXGGXXGGGGXGKGXPXRXXPAXFPGGXGG 745
G GG G GG G P + P PGG GG
Sbjct: 188 GQGGPPGHGGMGGPPPGQGGPGG-PGGPGG 216
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2
Query: 834 GXGGXXGGGGXGKGXPXRXXPAXFPGGXGG 745
G GG G GG G P + P PGG GG
Sbjct: 468 GQGGPPGHGGMGGPPPGQGGPGG-PGGPGG 496
>Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical
protein W01G7.1 protein.
Length = 627
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 793 PLPXSPPPXXPPXPXP 840
PLP PPP PP P P
Sbjct: 513 PLPPLPPPPPPPKPKP 528
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = -2
Query: 855 AGXXXGXGXGGXXGGGGXGKGXPXRXXPAXFPGGXGGXHXXXGKTXXTXSPG 700
AG G G GGGG G G A P G G G +PG
Sbjct: 98 AGGGGGGGYATGGGGGGGGGGCCSCGIGAAGPAGPPGADGNPGTDGAAGNPG 149
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 852 GXXXGXGXGGXXGGGGXGKGXPXRXXPAXFPGGXGG 745
G G GG GGGG G G GG GG
Sbjct: 790 GGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGG 825
>AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAuer
Formation DAF-5,a Ski oncogene homolog involved in a
neuronal TGF betapathway (71.0 kD) (daf-5) protein.
Length = 627
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 793 PLPXSPPPXXPPXPXP 840
PLP PPP PP P P
Sbjct: 513 PLPPLPPPPPPPKPKP 528
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 839 GXGXGGXXGGGXXGRGXPXGXXRXFSPG 756
G G GG GGG G G G + PG
Sbjct: 209 GMGGGGYGGGGDGGYGPSGGYGGGYGPG 236
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 142 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTS 291
P+ T T + +T+ T TTTL + + STT T T+ + TS
Sbjct: 407 PSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTS 456
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 142 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTS 291
P+ T T + +T+ T TTTL + + STT T T+ + TS
Sbjct: 407 PSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTS 456
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -2
Query: 852 GXXXGXGXGGXXGGGGXGKGXPXRXXPAXFPGGXGG 745
G G G GG GGG G G P + GG GG
Sbjct: 325 GGPVGGGGGGAKSGGGGG-GIPGQSVYMGAGGGGGG 359
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -2
Query: 852 GXXXGXGXGGXXGGGGXGKGXPXRXXPAXFPGGXGG 745
G G G GG GGG G G P + GG GG
Sbjct: 219 GGPVGGGGGGAKSGGGGG-GIPGQSVYMGAGGGGGG 253
>U40029-3|AAA81124.1| 269|Caenorhabditis elegans Hypothetical
protein F10G7.6 protein.
Length = 269
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +3
Query: 165 EPIDNRPYI-VNPPKDYNPNGNGYEPIDNG 251
EP D P + V PP + PN NG P NG
Sbjct: 239 EPDDPAPPLPVAPPPLHGPNNNGNGPAQNG 268
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +1
Query: 142 PTLKETATNLLTTARTSLILPKTTTLMET--ATNLSTTVHITWTLPKADLTSSLPLSLVL 315
PT+ T T ++TT T + +P T + T TN ST V T+ T S V+
Sbjct: 361 PTVATTPTTVVTTPSTVVTVPSTVVTVPTTVVTNPSTVVTAPSTVVTVPTTVMTSRSTVI 420
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,178,372
Number of Sequences: 27780
Number of extensions: 302801
Number of successful extensions: 1709
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1538
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -