Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_B23
(894 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 198 3e-50
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 198 3e-50
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 198 3e-50
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 198 3e-50
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 198 3e-50
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 198 3e-50
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 198 3e-50
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 198 3e-50
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 198 3e-50
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 198 3e-50
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 196 1e-49
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 188 2e-47
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 144 3e-34
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 143 9e-34
BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for MG... 77 9e-14
BC004907-1|AAH04907.2| 551|Homo sapiens EPS8-like 1 protein. 31 5.6
BC098569-1|AAH98569.1| 757|Homo sapiens hypothetical protein FL... 30 9.9
BC043210-1|AAH43210.1| 334|Homo sapiens FLJ22374 protein protein. 30 9.9
AK026027-1|BAB15327.1| 456|Homo sapiens protein ( Homo sapiens ... 30 9.9
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 198 bits (482), Expect = 3e-50
Identities = 90/161 (55%), Positives = 115/161 (71%)
Frame = +1
Query: 154 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRG 333
+L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRG
Sbjct: 27 VLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRG 86
Query: 334 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 513
M+PHKT+RG+ AL RL+ +DG PPP+D LKP R + ++GRL+HE+G
Sbjct: 87 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVG 146
Query: 514 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSK 636
WKY+ V LE+KRK KA +K+L R+ K A + V K
Sbjct: 147 WKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEK 187
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +3
Query: 87 KAIVIDGRGHLLGRLAAVIAK 149
+ +V+DGRGHLLGRLAA++AK
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAK 25
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 198 bits (482), Expect = 3e-50
Identities = 90/161 (55%), Positives = 115/161 (71%)
Frame = +1
Query: 154 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRG 333
+L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRG
Sbjct: 27 VLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRG 86
Query: 334 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 513
M+PHKT+RG+ AL RL+ +DG PPP+D LKP R + ++GRL+HE+G
Sbjct: 87 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVG 146
Query: 514 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSK 636
WKY+ V LE+KRK KA +K+L R+ K A + V K
Sbjct: 147 WKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEK 187
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +3
Query: 87 KAIVIDGRGHLLGRLAAVIAK 149
+ +V+DGRGHLLGRLAA++AK
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAK 25
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 198 bits (482), Expect = 3e-50
Identities = 90/161 (55%), Positives = 115/161 (71%)
Frame = +1
Query: 154 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRG 333
+L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRG
Sbjct: 27 VLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRG 86
Query: 334 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 513
M+PHKT+RG+ AL RL+ +DG PPP+D LKP R + ++GRL+HE+G
Sbjct: 87 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVG 146
Query: 514 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSK 636
WKY+ V LE+KRK KA +K+L R+ K A + V K
Sbjct: 147 WKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEK 187
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +3
Query: 87 KAIVIDGRGHLLGRLAAVIAK 149
+ +V+DGRGHLLGRLAA++AK
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAK 25
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 198 bits (482), Expect = 3e-50
Identities = 90/161 (55%), Positives = 115/161 (71%)
Frame = +1
Query: 154 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRG 333
+L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRG
Sbjct: 27 VLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRG 86
Query: 334 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 513
M+PHKT+RG+ AL RL+ +DG PPP+D LKP R + ++GRL+HE+G
Sbjct: 87 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVG 146
Query: 514 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSK 636
WKY+ V LE+KRK KA +K+L R+ K A + V K
Sbjct: 147 WKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEK 187
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +3
Query: 87 KAIVIDGRGHLLGRLAAVIAK 149
+ +V+DGRGHLLGRLAA++AK
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAK 25
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 198 bits (482), Expect = 3e-50
Identities = 90/161 (55%), Positives = 115/161 (71%)
Frame = +1
Query: 154 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRG 333
+L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRG
Sbjct: 27 VLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRG 86
Query: 334 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 513
M+PHKT+RG+ AL RL+ +DG PPP+D LKP R + ++GRL+HE+G
Sbjct: 87 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVG 146
Query: 514 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSK 636
WKY+ V LE+KRK KA +K+L R+ K A + V K
Sbjct: 147 WKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEK 187
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +3
Query: 87 KAIVIDGRGHLLGRLAAVIAK 149
+ +V+DGRGHLLGRLAA++AK
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAK 25
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 198 bits (482), Expect = 3e-50
Identities = 90/161 (55%), Positives = 115/161 (71%)
Frame = +1
Query: 154 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRG 333
+L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRG
Sbjct: 25 VLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRG 84
Query: 334 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 513
M+PHKT+RG+ AL RL+ +DG PPP+D LKP R + ++GRL+HE+G
Sbjct: 85 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVG 144
Query: 514 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSK 636
WKY+ V LE+KRK KA +K+L R+ K A + V K
Sbjct: 145 WKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEK 185
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +3
Query: 87 KAIVIDGRGHLLGRLAAVIAK 149
+ +V+DGRGHLLGRLAA++AK
Sbjct: 3 QVLVLDGRGHLLGRLAAIVAK 23
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 198 bits (482), Expect = 3e-50
Identities = 90/161 (55%), Positives = 115/161 (71%)
Frame = +1
Query: 154 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRG 333
+L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRG
Sbjct: 27 VLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRG 86
Query: 334 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 513
M+PHKT+RG+ AL RL+ +DG PPP+D LKP R + ++GRL+HE+G
Sbjct: 87 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVG 146
Query: 514 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSK 636
WKY+ V LE+KRK KA +K+L R+ K A + V K
Sbjct: 147 WKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEK 187
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +3
Query: 87 KAIVIDGRGHLLGRLAAVIAK 149
+ +V+DGRGHLLGRLAA++AK
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAK 25
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 198 bits (482), Expect = 3e-50
Identities = 90/161 (55%), Positives = 115/161 (71%)
Frame = +1
Query: 154 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRG 333
+L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRG
Sbjct: 27 VLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRG 86
Query: 334 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 513
M+PHKT+RG+ AL RL+ +DG PPP+D LKP R + ++GRL+HE+G
Sbjct: 87 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVG 146
Query: 514 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSK 636
WKY+ V LE+KRK KA +K+L R+ K A + V K
Sbjct: 147 WKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEK 187
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +3
Query: 87 KAIVIDGRGHLLGRLAAVIAK 149
+ +V+DGRGHLLGRLAA++AK
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAK 25
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 198 bits (482), Expect = 3e-50
Identities = 90/161 (55%), Positives = 115/161 (71%)
Frame = +1
Query: 154 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRG 333
+L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRG
Sbjct: 27 VLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRG 86
Query: 334 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 513
M+PHKT+RG+ AL RL+ +DG PPP+D LKP R + ++GRL+HE+G
Sbjct: 87 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVG 146
Query: 514 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSK 636
WKY+ V LE+KRK KA +K+L R+ K A + V K
Sbjct: 147 WKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEK 187
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +3
Query: 87 KAIVIDGRGHLLGRLAAVIAK 149
+ +V+DGRGHLLGRLAA++AK
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAK 25
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 198 bits (482), Expect = 3e-50
Identities = 90/161 (55%), Positives = 115/161 (71%)
Frame = +1
Query: 154 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRG 333
+L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRG
Sbjct: 27 VLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRG 86
Query: 334 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 513
M+PHKT+RG+ AL RL+ +DG PPP+D LKP R + ++GRL+HE+G
Sbjct: 87 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVG 146
Query: 514 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSK 636
WKY+ V LE+KRK KA +K+L R+ K A + V K
Sbjct: 147 WKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEK 187
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +3
Query: 87 KAIVIDGRGHLLGRLAAVIAK 149
+ +V+DGRGHLLGRLAA++AK
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAK 25
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 196 bits (477), Expect = 1e-49
Identities = 89/161 (55%), Positives = 114/161 (70%)
Frame = +1
Query: 154 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRG 333
+L G KVVVVRCE INISGNF+RNKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRG
Sbjct: 27 VLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRG 86
Query: 334 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 513
M+PHKT+RG+ AL L+ +DG PPP+D LKP R + ++GRL+HE+G
Sbjct: 87 MLPHKTKRGQAALDHLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVG 146
Query: 514 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSK 636
WKY+ V LE+KRK KA +K+L R+ K A + V K
Sbjct: 147 WKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEK 187
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +3
Query: 87 KAIVIDGRGHLLGRLAAVIAK 149
+ +V+DGRGHLLGRLAA++AK
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAK 25
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 188 bits (458), Expect = 2e-47
Identities = 86/161 (53%), Positives = 112/161 (69%)
Frame = +1
Query: 154 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRG 333
+L G KVVVV CE INISGNF+RNKL ++FLRKR N +P+RGP+HFRAPS++ W+TVRG
Sbjct: 27 VLLGRKVVVVCCEGINISGNFYRNKLNYLAFLRKRMNTSPSRGPYHFRAPSRVFWRTVRG 86
Query: 334 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 513
M+PHKT+RG+ AL RL+ DG PPP+D LKP R + ++GRL+HE+G
Sbjct: 87 MLPHKTKRGQAALDRLKVSDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVG 146
Query: 514 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSK 636
WKY+ V LE+KRK KA +K+L R+ K A + V K
Sbjct: 147 WKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEK 187
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +3
Query: 87 KAIVIDGRGHLLGRLAAVIAK 149
+ +V+DGRGHLLGRLAA++AK
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAK 25
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 144 bits (350), Expect = 3e-34
Identities = 64/125 (51%), Positives = 84/125 (67%)
Frame = +1
Query: 262 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 441
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 442 XXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAG 621
LKP R + ++GRL+HE+GWKY+ V LEDKRK KA +K+L R+ K A
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEDKRKEKAKIHYRKKKQLMRLRKQAE 121
Query: 622 EKVSK 636
+ V K
Sbjct: 122 KNVEK 126
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 143 bits (346), Expect = 9e-34
Identities = 63/125 (50%), Positives = 84/125 (67%)
Frame = +1
Query: 262 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 441
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 442 XXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAG 621
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAE 121
Query: 622 EKVSK 636
+ V K
Sbjct: 122 KNVEK 126
>BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for
MGC:87657) protein.
Length = 102
Score = 77.0 bits (181), Expect = 9e-14
Identities = 39/101 (38%), Positives = 55/101 (54%)
Frame = +1
Query: 334 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 513
M+ HKT+RG +L L+ +DG PPP+D LKP R + +GR + E+
Sbjct: 1 MLRHKTKRGHASLDCLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFALLGRQAQEVR 60
Query: 514 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSK 636
WKY+ V LE+KRK KA +K+L R+ K A + V K
Sbjct: 61 WKYQAVTATLEEKRKEKAKIHYWKKKQLMRLRKQAEKNVKK 101
>BC004907-1|AAH04907.2| 551|Homo sapiens EPS8-like 1 protein.
Length = 551
Score = 31.1 bits (67), Expect = 5.6
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 475 NYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLK 600
NY R S E+ K RDV+ LEDK K ++ V ++K K
Sbjct: 500 NYDFQARNSSELSVKQRDVLEVLEDKEKVSELEAVMEKQKKK 541
>BC098569-1|AAH98569.1| 757|Homo sapiens hypothetical protein
FLJ22374 protein.
Length = 757
Score = 30.3 bits (65), Expect = 9.9
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Frame = -2
Query: 281 PRAGFTLHLLRRNDISLSLFL-----KKLPEILICSQR---TTTTLFPSRRTLGDDCRQT 126
P+ F H LRR+ S S +K+PE+ +C+Q+ ++ PSR +LG T
Sbjct: 220 PQDSFHRHYLRRSSPSSSSTQPQEESRKVPELFVCTQQDILASSNSSPSRTSLGQLSELT 279
Query: 125 AQ-QMTTA 105
+ Q TTA
Sbjct: 280 VERQKTTA 287
>BC043210-1|AAH43210.1| 334|Homo sapiens FLJ22374 protein protein.
Length = 334
Score = 30.3 bits (65), Expect = 9.9
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Frame = -2
Query: 281 PRAGFTLHLLRRNDISLSLFL-----KKLPEILICSQR---TTTTLFPSRRTLGDDCRQT 126
P+ F H LRR+ S S +K+PE+ +C+Q+ ++ PSR +LG T
Sbjct: 220 PQDSFHRHYLRRSSPSSSSTQPQEESRKVPELFVCTQQDILASSNSSPSRTSLGQLSELT 279
Query: 125 AQ-QMTTA 105
+ Q TTA
Sbjct: 280 VERQKTTA 287
>AK026027-1|BAB15327.1| 456|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22374 fis, clone HRC06766. ).
Length = 456
Score = 30.3 bits (65), Expect = 9.9
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Frame = -2
Query: 281 PRAGFTLHLLRRNDISLSLFL-----KKLPEILICSQR---TTTTLFPSRRTLGDDCRQT 126
P+ F H LRR+ S S +K+PE+ +C+Q+ ++ PSR +LG T
Sbjct: 220 PQDSFHRHYLRRSSPSSSSTQPQEESRKVPELFVCTQQDILASSNSSPSRTSLGQLSELT 279
Query: 125 AQ-QMTTA 105
+ Q TTA
Sbjct: 280 VERQKTTA 287
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,925,725
Number of Sequences: 237096
Number of extensions: 2473311
Number of successful extensions: 19527
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19512
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -