Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_B23
(894 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46381-2|CAA86515.1| 202|Caenorhabditis elegans Hypothetical pr... 185 3e-47
U31528-1|AAA74904.1| 202|Caenorhabditis elegans 60S ribosomal p... 185 3e-47
AF038614-7|AAB92060.2| 664|Caenorhabditis elegans Hypothetical ... 32 0.48
Z81107-7|CAD31662.1| 119|Caenorhabditis elegans Hypothetical pr... 30 2.6
AF077531-4|AAC64611.1| 437|Caenorhabditis elegans Hypothetical ... 30 2.6
AF000263-16|AAG00014.1| 119|Caenorhabditis elegans Hypothetical... 30 2.6
U70857-6|AAD31051.1| 189|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 29 4.5
>Z46381-2|CAA86515.1| 202|Caenorhabditis elegans Hypothetical
protein M01F1.2 protein.
Length = 202
Score = 185 bits (451), Expect = 3e-47
Identities = 89/170 (52%), Positives = 115/170 (67%), Gaps = 4/170 (2%)
Frame = +1
Query: 154 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRG 333
LL+G+KVVV+R E+I ISGNF R+KLK MSFLRKRCN+NPARG FH+RAP KI W+TVRG
Sbjct: 28 LLQGDKVVVLRAEEIVISGNFHRSKLKYMSFLRKRCNINPARGAFHYRAPGKIFWRTVRG 87
Query: 334 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 513
M+PHKT RG AL+ LR Y+G P + F L+P R +C VGRLSHE+G
Sbjct: 88 MLPHKTNRGNEALKNLRAYEGVPAKYQK-TKSLHAPSASRFRLQPRRKFCVVGRLSHEVG 146
Query: 514 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRIT----KDAGEKVSKADNTI 651
W+++DVV KLE KRK K +KK+ ++ K+A K+++ I
Sbjct: 147 WQFQDVVAKLEAKRKVKGAAYFEQKKKMDKLAVQAKKNAAPKIAQYQKII 196
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/25 (68%), Positives = 23/25 (92%)
Frame = +3
Query: 75 GFSNKAIVIDGRGHLLGRLAAVIAK 149
G SN+AI+IDG+ HLLGRLA+++AK
Sbjct: 2 GLSNRAIIIDGKNHLLGRLASIVAK 26
>U31528-1|AAA74904.1| 202|Caenorhabditis elegans 60S ribosomal
protein L13A protein.
Length = 202
Score = 185 bits (451), Expect = 3e-47
Identities = 89/170 (52%), Positives = 115/170 (67%), Gaps = 4/170 (2%)
Frame = +1
Query: 154 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRG 333
LL+G+KVVV+R E+I ISGNF R+KLK MSFLRKRCN+NPARG FH+RAP KI W+TVRG
Sbjct: 28 LLQGDKVVVLRAEEIVISGNFHRSKLKYMSFLRKRCNINPARGAFHYRAPGKIFWRTVRG 87
Query: 334 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 513
M+PHKT RG AL+ LR Y+G P + F L+P R +C VGRLSHE+G
Sbjct: 88 MLPHKTNRGNEALKNLRAYEGVPAKYQK-TKSLHAPSASRFRLQPRRKFCVVGRLSHEVG 146
Query: 514 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRIT----KDAGEKVSKADNTI 651
W+++DVV KLE KRK K +KK+ ++ K+A K+++ I
Sbjct: 147 WQFQDVVAKLEAKRKVKGAAYFEQKKKMDKLAVQAKKNAAPKIAQYQKII 196
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/25 (68%), Positives = 23/25 (92%)
Frame = +3
Query: 75 GFSNKAIVIDGRGHLLGRLAAVIAK 149
G SN+AI+IDG+ HLLGRLA+++AK
Sbjct: 2 GLSNRAIIIDGKNHLLGRLASIVAK 26
>AF038614-7|AAB92060.2| 664|Caenorhabditis elegans Hypothetical
protein F15E6.9 protein.
Length = 664
Score = 32.3 bits (70), Expect = 0.48
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +1
Query: 475 NYCHVGRLS--HEIGWKYRDVVRKLEDKRKGKAVK-RVAYEKKLKRITKDAGEKV 630
+YC G+ S H I WKYRD V ++ K K A++ R A E K I D +KV
Sbjct: 284 DYC-TGKTSILHRIQWKYRDAV-IVQAKEKMSAIELRRAIEAKTNVILHDVEQKV 336
>Z81107-7|CAD31662.1| 119|Caenorhabditis elegans Hypothetical
protein R07H5.11 protein.
Length = 119
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +1
Query: 136 QSSPRVLLEGNKVVVV---RCEQINISGNFFRNKLKLMSFLRKRCN 264
+SSP L+ ++++V+ R E I + G FF+N+ K S K CN
Sbjct: 57 ESSPTTHLQPHRIMVLSRNRYESIGLRGKFFKNQKKCYS---KNCN 99
>AF077531-4|AAC64611.1| 437|Caenorhabditis elegans Hypothetical
protein F13C5.1 protein.
Length = 437
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 583 RQLS*QPCPSSCLQAYEQHHGISIQFHGTVCLHDSNY 473
R+ S C S L +E HHGI + G + L D++Y
Sbjct: 322 RKRSSAVCSSGSLTHFESHHGIKLLTIGVLPLDDNSY 358
>AF000263-16|AAG00014.1| 119|Caenorhabditis elegans Hypothetical
protein T08B2.4 protein.
Length = 119
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +1
Query: 136 QSSPRVLLEGNKVVVV---RCEQINISGNFFRNKLKLMSFLRKRCN 264
+SSP L+ ++++V+ R E I + G FF+N+ K S K CN
Sbjct: 57 ESSPTTHLQPHRIMVLSRNRYESIGLRGKFFKNQKKCYS---KNCN 99
>U70857-6|AAD31051.1| 189|Caenorhabditis elegans Hypothetical
protein C10G8.3 protein.
Length = 189
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 565 PCPSSCLQAYEQHHGISIQFHGTVCLHD 482
PCP E+ HGI++Q G CLH+
Sbjct: 143 PCPIGQTIVREKIHGITVQLLGKRCLHN 170
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/56 (28%), Positives = 20/56 (35%)
Frame = -3
Query: 529 HHGISIQFHGTVCLHDSNYGQVSDRRHVEQQALQHVDGYQREEGTHHMYVAS*EHS 362
HH H H +G V R H E H + E GTHH + H+
Sbjct: 381 HHEHKEGEHHEHAAHHDEHG-VHHRHHGEHHGTHHSPAHHGEHGTHHGHHGEHHHA 435
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,204,471
Number of Sequences: 27780
Number of extensions: 373398
Number of successful extensions: 960
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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