BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_B21
(879 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z81082-6|CAB03098.1| 279|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 33 0.27
AL034543-5|CAA22519.1| 279|Caenorhabditis elegans Hypothetical ... 33 0.27
AL034543-1|CAA22516.1| 243|Caenorhabditis elegans Hypothetical ... 33 0.27
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 33 0.36
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 31 0.82
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 31 0.82
U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical pr... 30 2.5
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical... 29 5.8
AF040654-1|AAK21448.1| 1236|Caenorhabditis elegans Hypothetical ... 29 5.8
Z82284-1|CAB05287.1| 226|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 28 7.7
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 28 7.7
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 37.9 bits (84), Expect = 0.009
Identities = 21/50 (42%), Positives = 24/50 (48%)
Frame = +1
Query: 172 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTS 321
TPT ET T TT T+ TTT ET T +TT T T P T+
Sbjct: 111 TPTTETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTT 160
Score = 31.9 bits (69), Expect = 0.62
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = +1
Query: 172 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSLP 330
TPT T T TT T+ P TTT T T +TT T T T++ P
Sbjct: 124 TPTTTTTTPTTTTTETT-TTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTP 175
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +1
Query: 172 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLT 318
TPT T T TT T+ +TTT T T +TT T T + T
Sbjct: 94 TPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTTT 142
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = +1
Query: 172 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWT 297
TPT T T TT T+ P TTT T T +TT T T
Sbjct: 77 TPTTPTTTT--TTPTTTTTTPTTTTTTPTTTTETTTTPTTET 116
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +1
Query: 175 PTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLP 303
PT T T TT T+ TTT T T +TT T T P
Sbjct: 217 PTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTP 259
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = +1
Query: 172 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSS 324
TPT T T TT + TTT T T +T T T P T++
Sbjct: 233 TPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTTT 283
>Z81082-6|CAB03098.1| 279|Caenorhabditis elegans Hypothetical
protein F42G4.6 protein.
Length = 279
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 162 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDPP 302
+VE+ D GN P ++ P +N PK + NG +P+DN YV+ P
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +1
Query: 172 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLP 303
TPT T+T TT T TTT T T +T T T+P
Sbjct: 86 TPTTTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTTTTTMP 129
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +1
Query: 178 TQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLP 303
T T T TT+ T+ P TTT T STT T T P
Sbjct: 61 TTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTP 102
>AL034543-5|CAA22519.1| 279|Caenorhabditis elegans Hypothetical
protein F42G4.6 protein.
Length = 279
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 162 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDPP 302
+VE+ D GN P ++ P +N PK + NG +P+DN YV+ P
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
>AL034543-1|CAA22516.1| 243|Caenorhabditis elegans Hypothetical
protein Y81G3A.1 protein.
Length = 243
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 162 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDPP 302
+VE+ D GN P ++ P +N PK + NG +P+DN YV+ P
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 32.7 bits (71), Expect = 0.36
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = +1
Query: 172 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSL 327
T TQ+ T+ TT ++ +P TTT E AT T T LPK L L
Sbjct: 117 TTTQKPTTSTTTTTTSTTPVPTTTTTTEAATTTVLTT-TTEELPKQQLAGRL 167
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +1
Query: 175 PTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSLPLSLVLAVG 354
P +ET T+L T PKTTT++ ++T ST +T +A T++ P + V
Sbjct: 440 PHKETTTSLATEQ------PKTTTIVASSTETST---VTTDATEATTTTTAPTTTVATTT 490
Query: 355 SKE 363
+K+
Sbjct: 491 TKK 493
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/55 (30%), Positives = 21/55 (38%)
Frame = +1
Query: 172 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSLPLS 336
T T+E T T+ P TTT T T T T P T+ PL+
Sbjct: 325 TTTEEATTTTEEITTTTTKAPTTTTTQSTTTTTQLPTTTTTTEPTTTTTTVDPLA 379
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 32.3 bits (70), Expect = 0.47
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +1
Query: 133 YGQRSRPRLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKAD 312
+G+ SR W P ET TT T+ +P TTT+ T T +T T T A
Sbjct: 291 FGEESRS----WPLPA-ETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAP 345
Query: 313 LTSSL 327
T+++
Sbjct: 346 TTTTM 350
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 32.3 bits (70), Expect = 0.47
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +1
Query: 133 YGQRSRPRLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKAD 312
+G+ SR W P ET TT T+ +P TTT+ T T +T T T A
Sbjct: 291 FGEESRS----WPLPA-ETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAP 345
Query: 313 LTSSL 327
T+++
Sbjct: 346 TTTTM 350
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 31.5 bits (68), Expect = 0.82
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 172 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTS-SLPLSLV 342
T T T T TT T+ P TTT T T +TT T T P T+ S PL+ V
Sbjct: 89 TTTTTTPTTTTTTPTTTTTTPTTTTTTPTTT--TTTPTTTTTTPTTTTTTRSTPLTEV 144
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 31.5 bits (68), Expect = 0.82
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +1
Query: 172 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHI---TWTLPKADLTSSLPLS 336
T T T T+ + T T++++ TTT +TTV + T T+P + T++ PL+
Sbjct: 193 TTTTTTTTSPMNTTTTTVLINGTTTTTVPTNETTTTVPLNGTTTTVPTNETTTTSPLN 250
>U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical
protein C30G12.1 protein.
Length = 469
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +1
Query: 169 KTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSS 324
KT Q T T + TT RTS +P TTT + + T P D T +
Sbjct: 288 KTNPQITTTTMTTTTRTSTAIPTTTTTPRQISLQTIPFSTTTRQPNFDKTKT 339
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +1
Query: 172 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHIT--WTLPKADLTSSLP 330
T + T T TT T+ P TTT T T +TT+ T T P T++ P
Sbjct: 299 TESTTTETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTTPTTTATTTKP 353
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +1
Query: 172 TPTQETATNLLTTARTSLILPKTTTLMETATNL-STTVHITWTLPKADLTSS 324
TPT T T TT TS P TTT T T STT T T+ T++
Sbjct: 293 TPTT-TTTESTTTETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTT 343
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +1
Query: 172 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSS 324
TPT T T TT + TTT T T STT T T T++
Sbjct: 268 TPTTTTTTPTTTTTTPTTTPTTTTTTPTTTTTESTTTETTSTTTPTTTTTA 318
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +1
Query: 172 TPTQETATNLLTTARTSLILPKTTTLMETATNL--STTVHITWTLPKADLTSS 324
TPT T T TT T+ P TTT T T +TT T T P T+S
Sbjct: 275 TPTTTTTTP-TTTPTTTTTTPTTTTTESTTTETTSTTTPTTTTTAPTTTTTAS 326
>Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical
protein F31B9.4 protein.
Length = 181
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = +1
Query: 172 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLP 303
T T A N+ TT T+ I P T T T +TTV T T P
Sbjct: 30 TTTTSPAPNITTTTTTTTIAPPTNTTTTILTT-TTTVTTTTTSP 72
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/68 (30%), Positives = 28/68 (41%)
Frame = +1
Query: 172 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSLPLSLVLAV 351
TP T T TT + + TTT T T TT T T P TS+ + +A
Sbjct: 416 TPLPTTTTTTTTTPKPTTTTTTTTTPAPTTTQKPTT---TTTTPAPTTTSTTSIPTTIAT 472
Query: 352 GSKEYLRK 375
+ L+K
Sbjct: 473 TTAAPLKK 480
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 172 TPTQETA--TNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSS 324
T T+ TA T + T ART+ P TTT + + T L TT+ + + D +S+
Sbjct: 379 TATRTTAKITAVATVARTNTTQPPTTTPLSSTTALPTTLTSSSSTESTDGSST 431
>AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical
protein Y57A10A.11 protein.
Length = 458
Score = 28.7 bits (61), Expect = 5.8
Identities = 28/103 (27%), Positives = 34/103 (33%), Gaps = 7/103 (6%)
Frame = +1
Query: 43 FWHNFNIFACDNS*SYKNEILHDFRPRSAGYG------QRSRPRLG*WKTPTQETATNLL 204
F FN A Y N+ F P GY + + P P + A
Sbjct: 71 FTRGFNRTARQAGYEYSNDETTPFAPPKFGYPVVGEAKEEANPYDAPAPPPPKTEAPTTT 130
Query: 205 TTARTSLILPKTTTLMETATNLSTTVHITWTL-PKADLTSSLP 330
T T+ TTT T T TT T T P T S+P
Sbjct: 131 TKKTTTTTTTTTTTTSTTTTEAPTTTKTTTTRRPSTTTTGSVP 173
>AF040654-1|AAK21448.1| 1236|Caenorhabditis elegans Hypothetical
protein R06B10.1 protein.
Length = 1236
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Frame = +3
Query: 177 DSGNGYEPIDNRPYIVNPPKDYNPNGNGY--EPIDNGAYY---VDPPQ 305
D+ N Y+P++ +VNP K + NG+ + + + A Y VDPP+
Sbjct: 824 DNANAYKPMNPIEMVVNPTKYAKKSSNGFMEKVVKDIAEYPKPVDPPK 871
>Z82284-1|CAB05287.1| 226|Caenorhabditis elegans Hypothetical
protein T27E7.1 protein.
Length = 226
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Frame = +3
Query: 168 ENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYE--PIDNGAYYVDPPQGRPYFKPT--PF 335
+N G + P N + N P + GY P PP+G Y++P P+
Sbjct: 34 QNPQPGASFPP--NMNPVTNGPGSWTQKPGGYNNGPGSGSFKSTKPPRGLVYYQPKNYPY 91
Query: 336 PGARGGK 356
+GGK
Sbjct: 92 KPGKGGK 98
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +1
Query: 172 TPTQETATNLLTT----ARTSLILPKTTTLMETATNLSTTVHITWTLP-KADLTSSLP 330
T T +T+T + TT T+ PK TT ETAT S+T +T P T++LP
Sbjct: 497 TTTVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 553
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +1
Query: 172 TPTQETATNLLTT----ARTSLILPKTTTLMETATNLSTTVHITWTLP-KADLTSSLP 330
T T +T+T + TT T+ PK TT ETAT S+T +T P T++LP
Sbjct: 338 TTTVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 394
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +1
Query: 172 TPTQETATNLLTT----ARTSLILPKTTTLMETATNLSTTVHITWTLP-KADLTSSLP 330
T T +T+T + TT T+ PK TT ETAT S+T +T P T++LP
Sbjct: 378 TTTVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 434
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,601,634
Number of Sequences: 27780
Number of extensions: 347294
Number of successful extensions: 985
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -