Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_B18
         (873 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0590 - 20853040-20853081,20853694-20853918,20854995-208558...    29   6.4  
10_08_0193 + 15634351-15634383,15634852-15635488,15635577-156356...    29   6.4  
07_01_0595 - 4432642-4432926,4433062-4433769,4433964-4434164,443...    28   8.5  
04_04_0384 - 24853689-24853727,24853802-24853861,24854311-248543...    28   8.5  

>12_02_0590 -
           20853040-20853081,20853694-20853918,20854995-20855886,
           20856120-20856122,20856284-20856513
          Length = 463

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 16/84 (19%), Positives = 40/84 (47%)
 Frame = +3

Query: 351 DKMIFRVMDIEGQLPKEMNGKFDNVFSFYTLQWIKNQEKAFQNIYDLMAKDGECLLTLLA 530
           D  +F  ++ +  + +E N +     S  T++   ++ +   +    +++   CLLTL  
Sbjct: 373 DTKVFSHVEGKNGMVEEDNSELKQSISIITMEEHDSKPEHGDSTTTAISRHALCLLTLRC 432

Query: 531 RIPVYSLFNALKDTDTWGYLLKYI 602
            + VY+  +A ++T  +  +  Y+
Sbjct: 433 MLTVYNFLHASQNTTAYLCMCYYL 456


>10_08_0193 +
           15634351-15634383,15634852-15635488,15635577-15635654,
           15635772-15635858,15635921-15635970
          Length = 294

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
 Frame = +3

Query: 285 EVFEACDINERAVKYATEYYGTDKMI-FRVMDIEGQLPKEMNG-----KFDNVFSFYTLQ 446
           EVF+      R  K   E  G+   + F V + + +L +EM       KFD +     L 
Sbjct: 80  EVFDDTIGKGRPDKCNCEVPGSTSCVRFHVAEKKTELKREMGSSYYAMKFDEIGQDAALT 139

Query: 447 WIKNQEKAFQNI 482
           W K++EK F+ I
Sbjct: 140 WQKDEEKKFETI 151


>07_01_0595 -
           4432642-4432926,4433062-4433769,4433964-4434164,
           4434296-4435288
          Length = 728

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -1

Query: 450 STAAYRTRKRYQTSHSSLSAVAPLCPSRGKSF 355
           +T+A     + QT  SS S+ AP+ PSRG +F
Sbjct: 686 TTSAPSLALQLQTMASSSSSSAPIIPSRGSAF 717


>04_04_0384 -
           24853689-24853727,24853802-24853861,24854311-24854357,
           24854487-24854565,24855184-24855279,24855645-24855714,
           24855787-24855857,24856010-24856105,24856501-24856628,
           24856733-24856853
          Length = 268

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -2

Query: 488 VVDVLKCFLLILDPLQRIERENVIKLPIHLF 396
           +V V+  + ++L PL  + R N+  +PIHLF
Sbjct: 120 IVTVMHAYKIVLLPLFPMLRVNICFMPIHLF 150


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,971,714
Number of Sequences: 37544
Number of extensions: 416806
Number of successful extensions: 1038
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)