Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_B18
         (873 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93382-7|CAB07618.1|  214|Caenorhabditis elegans Hypothetical pr...    37   0.022
U64834-3|AAB04824.1|  437|Caenorhabditis elegans Hypothetical pr...    32   0.62 
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical...    30   1.9  
AF039711-7|AAB96713.3|  154|Caenorhabditis elegans Calponin prot...    29   3.3  
Z35637-1|CAA84687.1|  363|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z81576-2|CAB04644.1|  522|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z81134-2|CAB03448.1|  120|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>Z93382-7|CAB07618.1|  214|Caenorhabditis elegans Hypothetical
           protein F45G2.9 protein.
          Length = 214

 Score = 36.7 bits (81), Expect = 0.022
 Identities = 22/80 (27%), Positives = 39/80 (48%)
 Frame = +3

Query: 45  IFNTMSEQNSQNYKAKSFAMNDDAALYQKSNCYPRRDAVDVLTEFLPKFRWKEGKKRIFD 224
           +F+T   Q +  +K       D+ A+  + + Y  R A  ++ E   KF++ + +  + D
Sbjct: 1   MFSTKKSQGNL-HKYIQRQSTDEFAVKAREHNYRARSAFKLI-EINEKFKFLKPESTVID 58

Query: 225 IGCADGSVTNIISAFCNNDY 284
           IGCA GS   ++   C N Y
Sbjct: 59  IGCAPGSWLQVVVQKCPNGY 78


>U64834-3|AAB04824.1|  437|Caenorhabditis elegans Hypothetical
           protein F54D11.1 protein.
          Length = 437

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +3

Query: 405 NGKFDNVFSFYTLQWIKNQEKAFQNIYDLMAKDGECLLTLLAR 533
           +  FD VFS   +Q I + EK F  IY  +   G+ L+T+  +
Sbjct: 289 DNSFDYVFSRDCIQHIPDTEKLFSRIYKALKPGGKVLITMYGK 331


>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
            protein Y26D4A.9 protein.
          Length = 1435

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 16/75 (21%), Positives = 36/75 (48%)
 Frame = +3

Query: 621  YHDVSDPDVIIQSLLEKVGFQYVDVRCRQKKYEFKDIQQLRNILXAVSPFNVDKKLYEQS 800
            Y+D    D  I +L+ K G    +     KKY+++++ ++ N    ++  ++ K+ YE +
Sbjct: 830  YYDEKYKDGNIFNLMRKKGVYPYEFMDSFKKYDYEELPEIENFYNKLNNEDISKEKYEYA 889

Query: 801  LTISWKSREXMXIID 845
              + W   +   + D
Sbjct: 890  QKV-WNETKCKNLKD 903


>AF039711-7|AAB96713.3|  154|Caenorhabditis elegans Calponin protein
           4 protein.
          Length = 154

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
 Frame = +3

Query: 366 RVMDIEGQLPKEMNGKFDNVFSFYTLQWIKNQEK------AFQNIYDLMAKDGECLLTLL 527
           R   + G +  +   KF++V + Y L+WI++  K      A ++ +    KDG+ L  L+
Sbjct: 9   RPAGMAGAILDKQASKFNDVEAGYLLEWIRDLTKEDFDCEASRDNFREQLKDGQRLCKLV 68

Query: 528 ARIPVYSLFNALKDTDTWGYLLKYINQF 611
             I   S+   +K    +   L+ INQF
Sbjct: 69  NAIKAGSVKKIMKPISNFN-CLENINQF 95


>Z35637-1|CAA84687.1|  363|Caenorhabditis elegans Hypothetical
           protein C03C10.2 protein.
          Length = 363

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
 Frame = +3

Query: 174 EFLPK-FRWKE-GKKRIFDIGCADGSVT----NIISAFCNNDY-EVFEACDI---NERAV 323
           + LPK F  KE  ++RI  +  A GS+     +I     N  Y ++F   D+   +ERA+
Sbjct: 41  DILPKKFSAKELAERRIKKLHVAPGSIFMNRWSIEGVIGNGGYGQIFMVMDVKKNDERAM 100

Query: 324 KYATEYYG---TDKMIFR---VMDIEGQ--LPKEMNGKFDNVFSFYTLQWIKNQEKAFQN 479
           K   +      T +MI     +M ++G+  +P      F++ F+F  +Q +      F+ 
Sbjct: 101 KIEPKLRAEVITKRMIMEQQVLMKMQGKTHIPTMYASGFNDQFNFIIMQLLSMNVGDFRK 160

Query: 480 IYDLMAKDGECLLTLLARIPVYSLFNALKDTDTWGYL 590
              L    G      + RI  Y   NALKD    GY+
Sbjct: 161 RSPL----GRLSKETVGRI-AYQTLNALKDIHDMGYV 192


>Z81576-2|CAB04644.1|  522|Caenorhabditis elegans Hypothetical
           protein R10E8.3 protein.
          Length = 522

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
 Frame = +3

Query: 18  LTIGNP*DLIFNTMSEQNSQNYKAKSFAMNDDAALYQKSNCYPRRDAVDVLTEFLPKFRW 197
           + +G+   L    ++   S+N+K  +    D  +L     C P+ + +D + +    ++W
Sbjct: 442 IPVGDVLFLAQELLASSLSRNFKLSTSNNFDLQSLIHSIGCPPKSETIDGIVQ----YKW 497

Query: 198 -KEGKKRIFDIGCADGSVTNI 257
             EGK++  +I   D  +T+I
Sbjct: 498 VLEGKEKKLEISVKDDVLTSI 518


>Z81134-2|CAB03448.1|  120|Caenorhabditis elegans Hypothetical
           protein T28D6.3 protein.
          Length = 120

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +3

Query: 237 DGSVTNIISAFCNNDYEVFEACDINERAVKYATEYYGTDKMIFRVMDIE 383
           +G+VTN++  F  +   V E  D+ +        YYG  K  +RV   E
Sbjct: 59  NGAVTNLVVVFQESWCSVEEGNDLEDVCESMCPVYYGGAKATYRVTATE 107


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,580,800
Number of Sequences: 27780
Number of extensions: 388458
Number of successful extensions: 1008
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)