Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_B13
         (1046 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0080 + 587674-588510                                             25   7.4  

>07_01_0080 + 587674-588510
          Length = 278

 Score = 24.6 bits (51), Expect(2) = 7.4
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = +1

Query: 787 PPPXXXXXXXXXXXXPPPPPP 849
           PPP            PPPPPP
Sbjct: 94  PPPPPPSSGSPPPPPPPPPPP 114



 Score = 24.2 bits (50), Expect(2) = 7.4
 Identities = 9/22 (40%), Positives = 9/22 (40%)
 Frame = +3

Query: 786 PPPXXXXXXXXXXXXXPPPPPP 851
           PPP             PPPPPP
Sbjct: 97  PPPSSGSPPPPPPPPPPPPPPP 118



 Score = 23.0 bits (47), Expect(2) = 7.4
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 834 PPPPPPXF 857
           PPPPPP F
Sbjct: 116 PPPPPPLF 123



 Score = 22.6 bits (46), Expect(2) = 7.4
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +1

Query: 832 PPPPPPXXF 858
           PPPPPP  F
Sbjct: 115 PPPPPPPLF 123


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,385,518
Number of Sequences: 37544
Number of extensions: 495519
Number of successful extensions: 8670
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3678
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3094456940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)