Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_B12
         (801 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0201 + 16302797-16302799,16303949-16304084,16304163-163042...    31   1.1  
02_05_0686 - 30900748-30902167,30903442-30904742                       30   2.5  
05_05_0387 + 24577448-24577638,24580375-24580767,24581078-245812...    28   9.9  

>02_03_0201 +
           16302797-16302799,16303949-16304084,16304163-16304250,
           16305531-16305683,16306647-16306809,16306906-16307090,
           16307164-16307337,16308055-16308200,16308369-16308492,
           16308608-16308788,16309302-16309371,16310155-16310196,
           16310276-16310394,16310474-16310672,16311442-16311573,
           16312435-16312538,16312641-16312820,16314000-16314090,
           16314100-16314139,16314225-16314364,16314500-16314660,
           16314897-16315020,16315104-16315255
          Length = 968

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +3

Query: 45  IXIDRLRRAHKSFRKCIL 98
           + IDRLRRAHK + KC+L
Sbjct: 713 LTIDRLRRAHKPYLKCLL 730


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +3

Query: 615 PPXXXXXXPPPPPXGXXXXPPXXGGXXXP 701
           PP      PPPPP G    PP  G    P
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPPPP 357



 Score = 28.3 bits (60), Expect = 7.5
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +3

Query: 615 PPXXXXXXPPPPPXGXXXXPPXXGG 689
           PP      PPPPP G    PP   G
Sbjct: 347 PPPAKGPPPPPPPKGPSPPPPPPPG 371


>05_05_0387 +
           24577448-24577638,24580375-24580767,24581078-24581208,
           24581460-24581899
          Length = 384

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -3

Query: 217 SADDRIANSLTHTFKLFKKVPSGSTAHNHYANDG 116
           +++D +A+ L   FKL  K+ S  +A  H+ N+G
Sbjct: 279 TSEDEVADWLIERFKLKNKLLSDFSALGHFPNEG 312


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,613,445
Number of Sequences: 37544
Number of extensions: 226156
Number of successful extensions: 1165
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)