Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_B11
         (875 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    27   0.30 
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   2.8  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    23   2.8  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    23   4.9  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   6.5  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   6.5  

>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 26.6 bits (56), Expect = 0.30
 Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
 Frame = +1

Query: 685 DGCIRSSGRFERRHGRGACC*--YPAWSWLHQXKCS 786
           DG   S      + G G C    YP WSW +   CS
Sbjct: 88  DGVPSSLNVISEKIGNGGCLLQPYPDWSWANYKDCS 123


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +1

Query: 748 YPAWSWLHQXKCS 786
           YP WSW     CS
Sbjct: 108 YPNWSWAKNQNCS 120


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 748 YPAWSWLHQXKCS 786
           YP WSW +   CS
Sbjct: 111 YPDWSWANYKDCS 123


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -3

Query: 819 PTSRRSLSLPSAAFPLVKPRPCRILAARASAVSALKSSRR 700
           P S +  SL  A F L  PRPC +LA   +    L++  R
Sbjct: 176 PKSGKGFSL-FARF-LKNPRPCNVLATSLTEPYTLRNYGR 213


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = +1

Query: 748 YPAWSWLHQXKCS 786
           YP W+W     CS
Sbjct: 105 YPDWTWAKNENCS 117


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/40 (22%), Positives = 20/40 (50%)
 Frame = +3

Query: 525 FRNTLTYSI*LEKCLLQIRLHFSASWRLTRRESNSRSSQK 644
           ++N + +++ L KC +++     A W +   E   R  Q+
Sbjct: 548 WKNAVRHNLSLHKCFMRVENVKGAVWTVDEVEFYKRRPQR 587


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,237
Number of Sequences: 438
Number of extensions: 4395
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)