Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_B08
(1078 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 26 0.15
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 29 0.24
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 29 0.24
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 29 0.24
AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP prot... 28 0.42
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 27 0.93
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 26 1.7
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 26 1.7
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 26 2.2
AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled ... 26 2.2
AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein... 26 2.2
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 25 3.9
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 25 3.9
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 25 3.9
AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcrip... 25 3.9
AY344828-1|AAR02439.1| 153|Anopheles gambiae peritrophin A prot... 25 5.1
AY344827-1|AAR02438.1| 153|Anopheles gambiae peritrophin A prot... 25 5.1
AY344826-1|AAR02437.1| 153|Anopheles gambiae peritrophin A prot... 25 5.1
AY344825-1|AAR02436.1| 153|Anopheles gambiae peritrophin A prot... 25 5.1
AY344824-1|AAR02435.1| 153|Anopheles gambiae peritrophin A prot... 25 5.1
AY578797-1|AAT07302.1| 304|Anopheles gambiae activin protein. 24 6.8
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 24 6.8
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 25.8 bits (54), Expect = 2.2
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 1070 AAGXXXXXXGGGGXGGGGXGXAA 1002
+ G GGGG GGGG G A
Sbjct: 161 SGGRSSSGGGGGGGGGGGAGSFA 183
Score = 24.2 bits (50), Expect(2) = 0.15
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 1040 GGGXGGGGXGXAAXPG 993
GGG GGG G + PG
Sbjct: 208 GGGAPGGGGGSSGGPG 223
Score = 23.8 bits (49), Expect(2) = 0.15
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 1070 AAGXXXXXXGGGGXGGGG 1017
++G GGGG GGGG
Sbjct: 160 SSGGRSSSGGGGGGGGGG 177
Score = 23.0 bits (47), Expect(2) = 2.5
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 1040 GGGXGGGGXGXAAXPG 993
GGG GGGG G G
Sbjct: 246 GGGNGGGGGGGMQLDG 261
Score = 20.6 bits (41), Expect(2) = 2.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 1043 GGGGXGGG 1020
GGGG GGG
Sbjct: 225 GGGGGGGG 232
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 29.1 bits (62), Expect = 0.24
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 1043 GGGGXGGGGXGXAAXP 996
GGGG GGGG G +A P
Sbjct: 299 GGGGGGGGGGGGSAGP 314
Score = 26.2 bits (55), Expect = 1.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 1043 GGGGXGGGGXGXAAXPG 993
GGGG GGGG G G
Sbjct: 297 GGGGGGGGGGGGGGSAG 313
Score = 25.0 bits (52), Expect = 3.9
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 1043 GGGGXGGGGXG 1011
GGGG GGGG G
Sbjct: 296 GGGGGGGGGGG 306
Score = 24.2 bits (50), Expect = 6.8
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 1043 GGGGXGGGGXGXAAXP 996
GGGG GGG G P
Sbjct: 303 GGGGGGGGSAGPVQQP 318
Score = 23.8 bits (49), Expect = 9.0
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 1040 GGGXGGGGXGXA 1005
GGG GGGG G A
Sbjct: 560 GGGGGGGGGGRA 571
Score = 23.8 bits (49), Expect = 9.0
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 1043 GGGGXGGGGXGXAAXPG 993
GGG GGGG G + G
Sbjct: 856 GGGSSGGGGSGGTSGGG 872
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 29.1 bits (62), Expect = 0.24
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 1043 GGGGXGGGGXGXAAXP 996
GGGG GGGG G +A P
Sbjct: 299 GGGGGGGGGGGGSAGP 314
Score = 26.6 bits (56), Expect = 1.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 1070 AAGXXXXXXGGGGXGGGGXGXAAXPG 993
AA GGGG GGGG G G
Sbjct: 645 AASVSPGSGGGGGGGGGGGGSVGSGG 670
Score = 26.2 bits (55), Expect = 1.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 1043 GGGGXGGGGXGXAAXPG 993
GGGG GGGG G G
Sbjct: 297 GGGGGGGGGGGGGGSAG 313
Score = 25.0 bits (52), Expect = 3.9
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 1043 GGGGXGGGGXG 1011
GGGG GGGG G
Sbjct: 296 GGGGGGGGGGG 306
Score = 24.6 bits (51), Expect = 5.1
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -3
Query: 1043 GGGGXGGGGXGXAAXPGXXXXXEXXXXKGRXGGR 942
G GG GGGG G G G GR
Sbjct: 651 GSGGGGGGGGGGGGSVGSGGIGSSSLGGGGGSGR 684
Score = 24.2 bits (50), Expect = 6.8
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 1043 GGGGXGGGGXGXAAXP 996
GGGG GGG G P
Sbjct: 303 GGGGGGGGSAGPVQQP 318
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 29.1 bits (62), Expect = 0.24
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 1043 GGGGXGGGGXGXAAXP 996
GGGG GGGG G +A P
Sbjct: 251 GGGGGGGGGGGGSAGP 266
Score = 26.2 bits (55), Expect = 1.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 1043 GGGGXGGGGXGXAAXPG 993
GGGG GGGG G G
Sbjct: 249 GGGGGGGGGGGGGGSAG 265
Score = 25.0 bits (52), Expect = 3.9
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 1043 GGGGXGGGGXG 1011
GGGG GGGG G
Sbjct: 248 GGGGGGGGGGG 258
Score = 24.2 bits (50), Expect = 6.8
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 1043 GGGGXGGGGXGXAAXP 996
GGGG GGG G P
Sbjct: 255 GGGGGGGGSAGPVQQP 270
>AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP protein.
Length = 151
Score = 28.3 bits (60), Expect = 0.42
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 5/40 (12%)
Frame = +2
Query: 959 PSXXXSPXPXXXPGXPPAP-----XPXPLXPPLXXPPPPP 1063
P+ P P PG P AP PL PP+ PPP
Sbjct: 81 PTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPP 120
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 26.6 bits (56), Expect = 1.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 783 PPPAPXPAPPXXXXPLXXGG 842
PPPAP P PP P G
Sbjct: 581 PPPAPPPPPPMGPPPSPLAG 600
Score = 26.2 bits (55), Expect = 1.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 784 PXPRPPPPXXTPPXPSXXXG 843
P P PPPP P PS G
Sbjct: 581 PPPAPPPPPPMGPPPSPLAG 600
Score = 25.4 bits (53), Expect = 2.9
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +1
Query: 1012 PXPPPPXPPPPXXXXXXP 1065
P PPPP PPP P
Sbjct: 585 PPPPPPMGPPPSPLAGGP 602
Score = 25.0 bits (52), Expect = 3.9
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 1037 PLXXPPPPPPXRA 1075
PL PPPPPP A
Sbjct: 527 PLGPPPPPPPGGA 539
Score = 25.0 bits (52), Expect = 3.9
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 983 PXXXPGXPPAPXPXPLXPPLXXPPPPPP 1066
P P P A P PP PPP P
Sbjct: 570 PAGFPNLPNAQPPPAPPPPPPMGPPPSP 597
Score = 24.6 bits (51), Expect(2) = 0.93
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +1
Query: 1018 PPPPXPPPPXXXXXXPAA 1071
PP P PPPP P A
Sbjct: 582 PPAPPPPPPMGPPPSPLA 599
Score = 24.6 bits (51), Expect = 5.1
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 608 PPRXXPXPXPPXPXXXXXXXGGXXGXPPPPPXXARXGAA 724
PP P PP P GG G PP P G A
Sbjct: 585 PPPPPPMGPPPSP-LAGGPLGGPAGSRPPLPNLLGFGGA 622
Score = 24.2 bits (50), Expect = 6.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 668 GGXXGXPPPPP 700
GG G PPPPP
Sbjct: 525 GGPLGPPPPPP 535
Score = 24.2 bits (50), Expect = 6.8
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +1
Query: 1021 PPPXPPPPXXXXXXPA 1068
PPP PPPP P+
Sbjct: 581 PPPAPPPPPPMGPPPS 596
Score = 20.6 bits (41), Expect(2) = 0.93
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 994 PGXAAXPXPPPPXPPP 1041
PG A PP PPP
Sbjct: 536 PGGAVLNIPPQFLPPP 551
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 26.2 bits (55), Expect = 1.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 1018 PPPPXPPPP 1044
PPPP PPPP
Sbjct: 783 PPPPPPPPP 791
Score = 22.2 bits (45), Expect(2) = 3.2
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +1
Query: 997 GXAAXPXPPPPXP 1035
G + P PPPP P
Sbjct: 779 GIGSPPPPPPPPP 791
Score = 21.0 bits (42), Expect(2) = 6.8
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +1
Query: 772 GXXXPXPRPPPP 807
G P P PPPP
Sbjct: 779 GIGSPPPPPPPP 790
Score = 21.0 bits (42), Expect(2) = 6.8
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +1
Query: 799 PPPXXTPPXPSXXXGXXP 852
PPP PP S G P
Sbjct: 783 PPPPPPPPPSSLSPGGVP 800
Score = 21.0 bits (42), Expect(2) = 3.2
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +1
Query: 1024 PPXPPPPXXXXXXP 1065
PP PPPP P
Sbjct: 783 PPPPPPPPPSSLSP 796
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 26.2 bits (55), Expect = 1.7
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -3
Query: 1043 GGGGXGGGGXGXA 1005
GGGG GGGG G A
Sbjct: 1495 GGGGGGGGGKGAA 1507
Score = 23.8 bits (49), Expect = 9.0
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 1043 GGGGXGGGGXGXAA 1002
G GG GGGG G A
Sbjct: 1493 GAGGGGGGGGGKGA 1506
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 25.8 bits (54), Expect = 2.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 1043 GGGGXGGGGXGXAAXPG 993
GGGG GGGG G G
Sbjct: 549 GGGGGGGGGGGGVIGSG 565
Score = 25.4 bits (53), Expect = 2.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 1043 GGGGXGGGGXGXAAXPG 993
GGGG GGGG G G
Sbjct: 547 GGGGGGGGGGGGGGVIG 563
Score = 24.6 bits (51), Expect = 5.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 1067 AGXXXXXXGGGGXGGGG 1017
AG GGGG GGGG
Sbjct: 544 AGVGGGGGGGGGGGGGG 560
>AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled
receptor protein.
Length = 611
Score = 25.8 bits (54), Expect = 2.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 1043 GGGGXGGGGXGXAAXPG 993
GGGG GGGG G G
Sbjct: 553 GGGGGGGGGGGGGGVGG 569
Score = 25.8 bits (54), Expect = 2.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 1043 GGGGXGGGGXGXAAXPG 993
GGGG GGGG G G
Sbjct: 554 GGGGGGGGGGGGGVGGG 570
Score = 25.4 bits (53), Expect = 2.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 1043 GGGGXGGGGXGXAAXPG 993
GGGG GGGG G G
Sbjct: 556 GGGGGGGGGGGVGGGIG 572
Score = 24.6 bits (51), Expect = 5.1
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -3
Query: 1040 GGGXGGGGXGXAAXPGXXXXXEXXXXKGRXGGR 942
GGG GGGG G G G G R
Sbjct: 553 GGGGGGGGGGGGGGVGGGIGLSLGGAAGVDGSR 585
>AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 612
Score = 25.8 bits (54), Expect = 2.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 1043 GGGGXGGGGXGXAAXPG 993
GGGG GGGG G G
Sbjct: 554 GGGGGGGGGGGGGGVGG 570
Score = 25.8 bits (54), Expect = 2.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 1043 GGGGXGGGGXGXAAXPG 993
GGGG GGGG G G
Sbjct: 555 GGGGGGGGGGGGGVGGG 571
Score = 25.4 bits (53), Expect = 2.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 1043 GGGGXGGGGXGXAAXPG 993
GGGG GGGG G G
Sbjct: 557 GGGGGGGGGGGVGGGIG 573
Score = 24.6 bits (51), Expect = 5.1
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -3
Query: 1040 GGGXGGGGXGXAAXPGXXXXXEXXXXKGRXGGR 942
GGG GGGG G G G G R
Sbjct: 554 GGGGGGGGGGGGGGVGGGIGLSLGGAAGVDGSR 586
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 25.0 bits (52), Expect = 3.9
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 1043 GGGGXGGGGXG 1011
GGGG GGGG G
Sbjct: 90 GGGGFGGGGYG 100
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 25.0 bits (52), Expect = 3.9
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 1043 GGGGXGGGGXG 1011
GGGG GGGG G
Sbjct: 947 GGGGGGGGGGG 957
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 25.0 bits (52), Expect = 3.9
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 1043 GGGGXGGGGXG 1011
GGGG GGGG G
Sbjct: 1713 GGGGGGGGGGG 1723
>AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcription
factor protein.
Length = 593
Score = 25.0 bits (52), Expect = 3.9
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 1043 GGGGXGGGGXG 1011
GGGG GGGG G
Sbjct: 14 GGGGGGGGGGG 24
Score = 25.0 bits (52), Expect = 3.9
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 1043 GGGGXGGGGXG 1011
GGGG GGGG G
Sbjct: 15 GGGGGGGGGGG 25
>AY344828-1|AAR02439.1| 153|Anopheles gambiae peritrophin A protein.
Length = 153
Score = 24.6 bits (51), Expect = 5.1
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 983 PXXXPGXPPAPXPXPLXPPLXXP 1051
P P PAP P P PP P
Sbjct: 79 PGVTPNTEPAPKPSPNCPPEYDP 101
>AY344827-1|AAR02438.1| 153|Anopheles gambiae peritrophin A protein.
Length = 153
Score = 24.6 bits (51), Expect = 5.1
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 983 PXXXPGXPPAPXPXPLXPPLXXP 1051
P P PAP P P PP P
Sbjct: 79 PGVTPNTEPAPKPSPNCPPEYDP 101
>AY344826-1|AAR02437.1| 153|Anopheles gambiae peritrophin A protein.
Length = 153
Score = 24.6 bits (51), Expect = 5.1
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 983 PXXXPGXPPAPXPXPLXPPLXXP 1051
P P PAP P P PP P
Sbjct: 79 PGVTPNTEPAPKPSPNCPPEYDP 101
>AY344825-1|AAR02436.1| 153|Anopheles gambiae peritrophin A protein.
Length = 153
Score = 24.6 bits (51), Expect = 5.1
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 983 PXXXPGXPPAPXPXPLXPPLXXP 1051
P P PAP P P PP P
Sbjct: 79 PGVTPNTEPAPKPSPNCPPEYDP 101
>AY344824-1|AAR02435.1| 153|Anopheles gambiae peritrophin A protein.
Length = 153
Score = 24.6 bits (51), Expect = 5.1
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 983 PXXXPGXPPAPXPXPLXPPLXXP 1051
P P PAP P P PP P
Sbjct: 79 PGVTPNTEPAPKPSPNCPPEYDP 101
>AY578797-1|AAT07302.1| 304|Anopheles gambiae activin protein.
Length = 304
Score = 24.2 bits (50), Expect = 6.8
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 1073 RAAGXXXXXXGGGGXGGGGXG 1011
R G GGGG GG G G
Sbjct: 239 RGLGKMHHKAGGGGGGGAGGG 259
Score = 23.8 bits (49), Expect = 9.0
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3
Query: 1043 GGGGXGGGGXGXA 1005
GGGG GGG G A
Sbjct: 251 GGGGGAGGGAGLA 263
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 24.2 bits (50), Expect = 6.8
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = -3
Query: 1043 GGGGXGGGGXGXAAXPGXXXXXEXXXXKGRXGG 945
GGGG GG G A E K + GG
Sbjct: 920 GGGGGSGGEEGSGAPKERKRKGEKKPRKSQGGG 952
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,476
Number of Sequences: 2352
Number of extensions: 9453
Number of successful extensions: 292
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 120452007
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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