Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_B07
(1329 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 32 0.89
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.5
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 31 2.0
08_01_0059 - 394001-394708 31 2.0
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 31 2.7
01_01_0082 + 625198-625719 30 3.6
12_02_1174 - 26696869-26698191 30 4.7
10_02_0157 - 5954439-5954801,5956244-5956270,5956465-5956526,595... 29 6.2
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 6.2
04_04_1125 + 31085106-31085714 29 8.3
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 32.3 bits (70), Expect = 0.89
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 682 PXPXLXXXPPPXXVSPXPXXPXAGNGPXXXPRQXPTPGXPXP 807
P P PPP P P P +GN P P P P P P
Sbjct: 537 PSPTAAAPPPP----PPPPPPPSGNKPAFSPPPPPPPPPPPP 574
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.5 bits (68), Expect = 1.5
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +1
Query: 682 PXPXLXXXPPPXXVSPXPXXPXAGNGPXXXPRQXPTPGXPXP 807
P P PPP P P P G P P+ P+P P P
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPK-GPSPPPPPP 369
Score = 30.3 bits (65), Expect = 3.6
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 682 PXPXLXXXPPPXXVSPXPXXPXAGNGPXXXPRQXPTPGXPXP 807
P P PPP P P P G P P G P P
Sbjct: 338 PPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPP 379
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +1
Query: 682 PXPXLXXXPPPXXVSPXPXXPXAGNGPXXXPRQXPTP 792
P P L PPP P P P GP +Q P P
Sbjct: 48 PPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPP 84
>08_01_0059 - 394001-394708
Length = 235
Score = 31.1 bits (67), Expect = 2.0
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = +3
Query: 681 TXXXPXXXXPPXXGXPXPXXPPXXXWXXXXPPPGSHXRXPXSXHXRAPKXASIPPXXHXP 860
T P PP P PP PPP SH P H P A +PP P
Sbjct: 16 TPPPPPRRAPPPPSPPIRPPPPPTP-RPYAPPPPSHPLAPPPPHISPP--APVPPPPSPP 72
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 30.7 bits (66), Expect = 2.7
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +1
Query: 682 PXPXLXXXPPPXXVS--PXPXXPXAGNGPXXXPRQXPTPGXPXP 807
P P PPP S P P P +GP P P P P P
Sbjct: 1164 PPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPPP 1207
Score = 29.9 bits (64), Expect = 4.7
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +1
Query: 682 PXPXLXXXPPPXXVSPXPXXPXAGNGPXXXPRQ-XPTPGXPXPST 813
P P PPP P P P P P Q P P P PS+
Sbjct: 1172 PPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPPPIPPPPVPSS 1216
>01_01_0082 + 625198-625719
Length = 173
Score = 30.3 bits (65), Expect = 3.6
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +1
Query: 682 PXPXLXXXPPPXXVSPX-PXXPXAGNGPXXXPRQXPTPG-XPXPS 810
P P PPP S P P G G P PTPG P PS
Sbjct: 76 PSPPPVAYPPPTTPSTNCPPPPYGGGGYNPTPSYNPTPGYNPTPS 120
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.9 bits (64), Expect = 4.7
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +1
Query: 682 PXPXLXXXPPPXXVSPXPXXPXAGNGPXXXPRQXPTPGXPXPS 810
P P L PPP P P P + P P+ P P PS
Sbjct: 148 PPPSLPPPPPPP-PPPPPPRPPSVKPPVVQPKPQPPPSLQPPS 189
>10_02_0157 -
5954439-5954801,5956244-5956270,5956465-5956526,
5956971-5957592
Length = 357
Score = 29.5 bits (63), Expect = 6.2
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +1
Query: 688 PXLXXXPPPXXVSPXPXXPXAGNGPXXXPRQXPTPGXPXPS 810
P L PPP V+P P P P P P P P P+
Sbjct: 48 PPLPTTPPPAVVAPSPPLPPLTPPPAIVPPALPPP-PPLPA 87
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.5 bits (63), Expect = 6.2
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 706 PPPXXVSPXPXXPXAGNGPXXXPRQXPTPGXPXPST 813
PPP + P P P A P P P P P T
Sbjct: 90 PPPPPLLPTPPPPPASISPTPAPPLPPPPAPAPPPT 125
Score = 29.5 bits (63), Expect = 6.2
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +1
Query: 682 PXPXLX-XXPPPXXVSPXPXXPXAGNGPXXXPRQXPTPGXPXPST 813
P P L PPP +SP P P P P PTP PS+
Sbjct: 92 PPPLLPTPPPPPASISPTPAPPLP---PPPAPAPPPTPTPKFPSS 133
>04_04_1125 + 31085106-31085714
Length = 202
Score = 29.1 bits (62), Expect = 8.3
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +1
Query: 682 PXPXLXXXPPPXXVSPXPXXPXAGNGPXXXPRQXPTPGXPXPST 813
P P PPP +P P P P P PTP P P T
Sbjct: 39 PPPPPCQPPPP---TPTPATPTTPPTPWTPPPATPTPPTPTPWT 79
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,425,048
Number of Sequences: 37544
Number of extensions: 179056
Number of successful extensions: 827
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4166995416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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