Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_B07
         (1329 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79596-2|CAC42251.1|  838|Caenorhabditis elegans Hypothetical pr...    31   1.8  
AF167982-1|AAD50438.1|  838|Caenorhabditis elegans dynamin protein.    31   1.8  
Z79596-1|CAB01857.1|  830|Caenorhabditis elegans Hypothetical pr...    31   2.4  
L29031-1|AAB72228.2|  830|Caenorhabditis elegans dynamin protein.      31   2.4  
AL023835-10|CAA19494.2|  691|Caenorhabditis elegans Hypothetical...    29   9.8  
AF000198-8|AAP68908.1|  435|Caenorhabditis elegans Collagen prot...    29   9.8  

>Z79596-2|CAC42251.1|  838|Caenorhabditis elegans Hypothetical
           protein C02C6.1b protein.
          Length = 838

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
 Frame = +1

Query: 706 PPPXXVSPXPXXPXAGNG--PXXXPRQXPTPGXPXP 807
           PPP  + P P  P  G G  P   P + PTP    P
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPPLIPTRVPTPSNGAP 825


>AF167982-1|AAD50438.1|  838|Caenorhabditis elegans dynamin protein.
          Length = 838

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
 Frame = +1

Query: 706 PPPXXVSPXPXXPXAGNG--PXXXPRQXPTPGXPXP 807
           PPP  + P P  P  G G  P   P + PTP    P
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPPLIPTRVPTPSNGAP 825


>Z79596-1|CAB01857.1|  830|Caenorhabditis elegans Hypothetical
           protein C02C6.1a protein.
          Length = 830

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +1

Query: 706 PPPXXVSPXPXXPXAGNG--PXXXPRQXPTPGXPXPS 810
           PPP  + P P  P  G G  P   P + P PG P P+
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPPLIPTR-PGPGGPPPN 825


>L29031-1|AAB72228.2|  830|Caenorhabditis elegans dynamin protein.
          Length = 830

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +1

Query: 706 PPPXXVSPXPXXPXAGNG--PXXXPRQXPTPGXPXPS 810
           PPP  + P P  P  G G  P   P + P PG P P+
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPPLIPTR-PGPGGPPPN 825


>AL023835-10|CAA19494.2|  691|Caenorhabditis elegans Hypothetical
           protein Y37A1B.11 protein.
          Length = 691

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 15/43 (34%), Positives = 17/43 (39%)
 Frame = +1

Query: 682 PXPXLXXXPPPXXVSPXPXXPXAGNGPXXXPRQXPTPGXPXPS 810
           P P     PPP    P P  P     P   P + PTP  P P+
Sbjct: 540 PSPVREPTPPPPPREPTPREPT----PEPEPVREPTPPPPPPA 578


>AF000198-8|AAP68908.1|  435|Caenorhabditis elegans Collagen protein
           51 protein.
          Length = 435

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 14/44 (31%), Positives = 16/44 (36%)
 Frame = +1

Query: 682 PXPXLXXXPPPXXVSPXPXXPXAGNGPXXXPRQXPTPGXPXPST 813
           P P      PP    P P  P   +G    P Q   PG P  +T
Sbjct: 201 PGPDGDAGSPPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNT 244


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,475,246
Number of Sequences: 27780
Number of extensions: 109210
Number of successful extensions: 494
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 441
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3725590724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)