Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_B03
         (1374 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical pr...    31   1.9  
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr...    30   3.3  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    30   4.4  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    30   4.4  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    30   4.4  
U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical pr...    29   5.8  

>U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical
           protein C34D4.11 protein.
          Length = 136

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 18/50 (36%), Positives = 18/50 (36%)
 Frame = -3

Query: 304 GGEGXXXGGXXXGXXGXREARXXXXGRGXAXXXGGXRXXXPGXVXXGGRG 155
           GG G   GG   G  G         GRG     GG R    G    GGRG
Sbjct: 85  GGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGGRG 134


>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
           protein F15B9.4 protein.
          Length = 1140

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 23/75 (30%), Positives = 25/75 (33%), Gaps = 5/75 (6%)
 Frame = +2

Query: 92  PXXXPXPRLNXXXPNXLLXXPPPPPXLXXARXXXAXPXXXPRXTPSXXXXSXFTXALGP- 268
           P   P P +N   PN     PPPPP L  A      P   P    +       T    P 
Sbjct: 488 PPPPPMPSINGHAPNP----PPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPP 543

Query: 269 ----XXXPPXXPPLP 301
                  PP  PPLP
Sbjct: 544 VGMANGGPPPPPPLP 558


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 16/51 (31%), Positives = 16/51 (31%)
 Frame = +3

Query: 153 PPLPPXXTXPGXXXRXPPXXXAXPLPXXXXLASRXPXXPXXXPPXSXPSPP 305
           PP PP    P      PP      LP         P  P   PP   P PP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 16/51 (31%), Positives = 16/51 (31%)
 Frame = +3

Query: 153 PPLPPXXTXPGXXXRXPPXXXAXPLPXXXXLASRXPXXPXXXPPXSXPSPP 305
           PP PP    P      PP      LP         P  P   PP   P PP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 16/51 (31%), Positives = 16/51 (31%)
 Frame = +3

Query: 153 PPLPPXXTXPGXXXRXPPXXXAXPLPXXXXLASRXPXXPXXXPPXSXPSPP 305
           PP PP    P      PP      LP         P  P   PP   P PP
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360


>U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical
           protein B0280.13 protein.
          Length = 616

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 20/65 (30%), Positives = 21/65 (32%)
 Frame = +1

Query: 112 PXKPXXT*PPPXXXPPSPPSXXXPXXXXXTXLXSXPHPFXXXGXXLHARPXXRXPPPPXP 291
           P  P    PPP   P   PS   P     +     P P           P    PPPP P
Sbjct: 467 PTTPKPAPPPPSRIPNPSPS---PQPAEVSKSPPPPPPLPPIATPSSVPPP---PPPPPP 520

Query: 292 XPPXL 306
            PP L
Sbjct: 521 PPPAL 525


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,497,284
Number of Sequences: 27780
Number of extensions: 129665
Number of successful extensions: 949
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3881690894
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)